Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3042 ATGGTTACTTATTCTTTTTGTTGCTGGGTCTTGTTCTTTCTGGTCGTGGGTGGACTTGGTGGGTGCGTTATATCGAGCAAGATAATTGTGGGCTCGAGACTAATGGCTAGCAGAGGTGAGGCATGGGTTTCAGATAATGGCACATTCGCGTTTGGGTTCACTACTTGCCCAGAAACCGTTCATAACGATGATGACGATGGCGACAACAATGATAAGTTATTTGTACTTGCCATTTGGTTCTTTAAGCTTCCTGGAGATCCAACTTTGGTTTGGTCACCTAATAGAGATTATCCGGCGTCTCGAAATGCCATCTTGGAGCTCGGCATCACTGGAAACCTCGTTCTCTCAGACGGCCATGACATCCTTTGGGCCTCAAACACCTCTGGCACCGGCGTCAATTCGGCGTCCATGGAGGAATCCAGCAACTTCATCCTCTATGCGTCATCCACCGCCAGCCTCCCTGTGTGGCAGAGCTTCTCACAGCCATCTGACACCCTCCTGCCAAACCAACCTTTAACAGCCTCCTCGGAATTGACATCCTCAAAGTCAGCCTCTCATGGTGGCTTCTACGCTCTCAAAATGCTTCAACAAACCACTTCTTTAAGCCTTGGCCTCACTTATATTCCCCCAAATTCAGAACCTTACACCAATTATTCCTACTGGCAAGGGCCGGATATCTCCAATGTCACAGGCAATGTCACAGCAATTTTAGATCCAGCAGGAAGCTTCGGGATTGTGTATGGAGACTCTTCAGATGGGGCTGTTTATGTGTACAAAAATGATAACGATGAATTGGGGTTATCTTATTCGTCTCACCCAACAATCCCATTCAGCACTCTTAGAAGATTGACGCTGGAAAATAATGGAAATTTGCATTTGTATCGTTGGGATGATGATGTGAATGGCTCAAGACAGTGGGTATCAGAGTGGGCTGCAGTATCAAACCCCTGTGATATTGCTGGAATTTGTGGTAATGGGGTTTGTAAATTAGATAGAGGTAAGACAAATGCTTCTTGTACATGCTTGCCGGGGACTTCTCAAGTTGGAAGGGATGGCCTTTGCTATGAGAATTCTTCACTAGTGGGAAAATGCAGTTTCCAACTCGAAAACAAGAACCAAACCAAAACATCAGAGTTTAACATTTCTGTAGTGCAGCAGACGAATTATTATTTTTCTGAAACTTCTGTGGTAGCAAACTACAGTGATGTTGCTACTGTGTCAAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGGCTAAATGAAGAAACACCGTATTGTTGGGTATTAAGGAGCTTGGATTTTGGGGGGTTTGAAGATTCTAGCTCGACCCTATTTGTGAAGGTCAGATCAAATGGTTCTATGACTCCAGAAGGGTCTAGCAATAATTCTGATGGTGAGGTTGAAGAGAAGGCTGTGGTCCTTCCTGTTGTCCTTAGCATGGCACTTCTTGTTGCCCTGTTATGTTTACTGTTATACTATAGTGTTCATCGAAAAAGAACTTTAAAAAGGGAGATGGAAAGTTCATTGATCTTATCTGGTGCTCCTATGAACTTCTCCTACCATGATTTGCAGATCAGGACCTGTAACTTCTCGCAGTTGCTAGGAACAGGTGGCTTTGGAAGTGTGTACAAAGGAAGTCTTGGAGATGGGACACTAGTGGCAGTAAAGAAACTTGATAGGGTTTTGCCTCATGGAGAGAAGGAATTTATCGCTGAAGTAAGCACCATTGGCTCAATGCACCACATGAACTTGGTTCGCTTATGCGGCTATTGCTCGGAGGGATCACATCGGCTTCTAGTCTATGAGTTCATGAAAAATGGGTCTTTGGACAAATGGATCTTCTCTTCATATCAAGGACGAGATAGGCTGTTGGATTGGCAAACTCGGTTTGATATAGCTATTGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGTAGGAATAGAATAATACACTGTGACATAAAACCAGAAAATATTCTCCTCGATGAGAATTTTTGTCCCAAAGTGTCTGATTTTGGGTTGGCAAAACTGATGGGAAGGGAGCACTCTCAGGTGGTAACAATGGTGAGAGGGACTAGAGGTTATTTGGCACCGGAATGGGTTAGTAATCGGCCAATAACTGTAAAAGCTGATGTTTATAGCTATGGGATGCTACTATTAGAGATCATTGGTGGACGGAGAAATCTTGACATGTCCTTTAATGCAGAGGACTTCTTCTATCCTGGTTGGGCTTTTAAGGAGCTGACAAATGGGGTAGCAATAAAAGCAGCAGATAGGAGACTAAATGGGGCGGTTGATGAAGAGGAGCTGGTTAGAGCCTTGAGGGTTGCATTTTGGTGCATTCAAGATGAGGTTTTCATGAGACCAACAATGGGAGAAGTGGTAAGGATGCTGGAAGGGTCTATCAGCATCAACACACCACCAATGCCACAAACAGTCACGGAGTTGATTGAGGAAGGCTTAGAGCAAGTGTACAAAGCTATGAAGAGAGAGTATAATCCCTACAGCTCATTCACTTTGACCAGCCATCCTTCTTCTCTCGCAACTTGTAGCACTTCCACAATGTCACCTAGATAG 2604 0.442 MVTYSFCCWVLFFLVVGGLGGCVISSKIIVGSRLMASRGEAWVSDNGTFAFGFTTCPETVHNDDDDGDNNDKLFVLAIWFFKLPGDPTLVWSPNRDYPASRNAILELGITGNLVLSDGHDILWASNTSGTGVNSASMEESSNFILYASSTASLPVWQSFSQPSDTLLPNQPLTASSELTSSKSASHGGFYALKMLQQTTSLSLGLTYIPPNSEPYTNYSYWQGPDISNVTGNVTAILDPAGSFGIVYGDSSDGAVYVYKNDNDELGLSYSSHPTIPFSTLRRLTLENNGNLHLYRWDDDVNGSRQWVSEWAAVSNPCDIAGICGNGVCKLDRGKTNASCTCLPGTSQVGRDGLCYENSSLVGKCSFQLENKNQTKTSEFNISVVQQTNYYFSETSVVANYSDVATVSKCGDACLSDCDCVASVYGLNEETPYCWVLRSLDFGGFEDSSSTLFVKVRSNGSMTPEGSSNNSDGEVEEKAVVLPVVLSMALLVALLCLLLYYSVHRKRTLKREMESSLILSGAPMNFSYHDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFIAEVSTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFSSYQGRDRLLDWQTRFDIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFNAEDFFYPGWAFKELTNGVAIKAADRRLNGAVDEEELVRALRVAFWCIQDEVFMRPTMGEVVRMLEGSISINTPPMPQTVTELIEEGLEQVYKAMKREYNPYSSFTLTSHPSSLATCSTSTMSPR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3042 867 ProSiteProfiles Protein kinase domain profile. 535 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3042 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 246 IPR036426 -
Acco02g3042 867 Pfam D-mannose binding lectin 88 176 IPR001480 -
Acco02g3042 867 PANTHER OS07G0415500 PROTEIN 10 819 - -
Acco02g3042 867 Pfam Protein kinase domain 538 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3042 867 FunFam serine/threonine-protein kinase PBS1-like 503 610 - -
Acco02g3042 867 Pfam S-locus glycoprotein domain 260 344 IPR000858 GO:0048544
Acco02g3042 867 Gene3D Phosphorylase Kinase; domain 1 499 610 - -
Acco02g3042 867 Gene3D - 26 161 IPR036426 -
Acco02g3042 867 PIRSF SRK 1 860 IPR024171 GO:0004674
Acco02g3042 867 SMART blect_4 33 162 IPR001480 -
Acco02g3042 867 Gene3D Transferase(Phosphotransferase) domain 1 611 825 - -
Acco02g3042 867 SUPERFAMILY Protein kinase-like (PK-like) 513 808 IPR011009 -
Acco02g3042 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 611 817 - -
Acco02g3042 867 ProSitePatterns Protein kinases ATP-binding region signature. 541 564 IPR017441 GO:0005524
Acco02g3042 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Acco02g3042 867 ProSiteProfiles Bulb-type lectin domain profile. 27 158 IPR001480 -
Acco02g3042 867 SMART serkin_6 535 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3042 867 CDD STKc_IRAK 541 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3042 Acco-ChrAcco02 40227823 40234876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3042 485 817 Receptor kinase-like Gene Family AT5G20050 41.598 1.91e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco02g3042 Pkinase 3.1e-46 CL0016