Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3003 ATGGATCACACCCTCCAAGCCGTCCTCGCCGCCGCCATTAGCTTCTTCATCGTCACCCTCATCTTCGCAGCCATCATCCTCCTCTGCAAAAGCAACACCAAAACCCATCCCCGTCAGCGTCAATACCGTACCCCAACTCAAAATCGGACCCAGTCGGAGCTATCCTCCGTCGTCGTCGACGGTAGCTGGTCGTTCGATCCCTACGTTCAGTTCACTTGGGACGAGATCACTAAAGCTACTAATAATTTCTCCCCCGACCTCATCATCGGCGACGGCAGCTTCGGCCTCGTCTACAAAGCGAGTCTCTCCAACGGCCTCGTCGTCGCCATCAAGAAGCTCTCGCCGGACGCATTCCAAGGATTTCGTGAATTCCGTGCTGAGATGGAAACCCTAGCTAAGCTCCGGCATCCAAATATCGTCAGGATCCTCGGTTACTGGTCGGCGGGACAGGAGAGAATGTTGGTCTACGAGTTCATGGAGAGAGGCAATCTCGATCAATGGTTTCACGATCCAACGATCTCATCGTCGTCTGGACACGACGATGTTTCAATGCCGCGGGCCCCACTCCCGTGGAGGGTGAGGTTGAAGATAATCAGAGGCATTGCAAATGGGCTTGTTTACTTACATGGGCTGGACAAGCCCATTATTCACAGAGACATTAAGGCTGGTAATGTGTTGCTGGATTCTGATTTTGAGGCCCATATTGCTGATTTTGGGCTCGCTAGGAGGATTGATGCTTCGAACTCTCATGTGTCGACTCAGTTCGCCGGAACCATGGGTTACATGCCGCCGGAGTACAGAAATGGGGTGAATGTGGCTAATGTGAAGGTGGATGTCTATAGTTTTGGGGTTTTGATGCTTGAAACCGCGACAGGCCGGCGGCCCAATCTGTCGGTGAAGTTTGAGAATCAGGATATTGGGCTTGTGCAATGGGCCATGAAAATGGAGGCCCAGAACTCCGAAATGGAAATGGTTGATCCCAATATTTCAAGAGAAGGAATAAGTGAAGATAGTGTGAAGGAGTACTTTAGGATTGCTTGTAAGTGCACGAGTGAATTCCAGAAAGACAGACCTGTGATGCCAGAAGTGTTGGAATTGTTCGAGAAGATGGCCATGTAA 1119 0.5085 MDHTLQAVLAAAISFFIVTLIFAAIILLCKSNTKTHPRQRQYRTPTQNRTQSELSSVVVDGSWSFDPYVQFTWDEITKATNNFSPDLIIGDGSFGLVYKASLSNGLVVAIKKLSPDAFQGFREFRAEMETLAKLRHPNIVRILGYWSAGQERMLVYEFMERGNLDQWFHDPTISSSSGHDDVSMPRAPLPWRVRLKIIRGIANGLVYLHGLDKPIIHRDIKAGNVLLDSDFEAHIADFGLARRIDASNSHVSTQFAGTMGYMPPEYRNGVNVANVKVDVYSFGVLMLETATGRRPNLSVKFENQDIGLVQWAMKMEAQNSEMEMVDPNISREGISEDSVKEYFRIACKCTSEFQKDRPVMPEVLELFEKMAM 372
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3003 372 Gene3D Phosphorylase Kinase; domain 1 43 158 - -
Acco02g3003 372 Gene3D Transferase(Phosphotransferase) domain 1 159 372 - -
Acco02g3003 372 FunFam Phytosulfokine receptor 2 45 158 - -
Acco02g3003 372 FunFam Phytosulfokine receptor 2 159 371 - -
Acco02g3003 372 Pfam Protein kinase domain 88 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3003 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Acco02g3003 372 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 369 - -
Acco02g3003 372 SUPERFAMILY Protein kinase-like (PK-like) 63 367 IPR011009 -
Acco02g3003 372 CDD STKc_IRAK 89 370 - -
Acco02g3003 372 ProSiteProfiles Protein kinase domain profile. 83 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3003 372 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Acco02g3003 372 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco02g3003 Acco-ChrAcco02 39022212 39023330 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3003 67 370 Receptor kinase-like Gene Family AT5G07280 45.574 3.00e-74 248
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco02g3003 Pkinase 1.7e-43 CL0016