Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2998 ATGCTCGTAAGCTTAACCCAAATCATCACACGCAAACATCGCCATGTCGCGGAGTTCTCGAGATTCACGGGCCATGACGGCGCCGCAGATGAGGAAGAATCACTGAACCCATCTGCAGCTGCGGTGGCGGCGGCCGGTGAGGATGAGGAGGAGAAGGAAGGTGTGTTTTCTGGATATAGCAGCAACAAAGAAGGTGAATTGACGGCGATGGTTTCGGCGCTGACGCATGTGGTATCTGGATCTGGTGGTCAGGGTCGCACCGAATGGATACCTGTGATGACATCTCCTGGCCAGCCTTCTCCTTCTTCTTCTGTTTTGTCGCCATACTTGTCTTCTTCTTCTTCTTCTTCTTTATCCTCTGCTTCAGGCTCTGCCTCTGGTTCTACAGTTTCATGGGTTGGCCACAAACGAGCTCGTGACCAACACAGCTCTGTCTATGGATCTTTCTCTGAATTCAGAGTTCCTTCTCAGGGACAATCATCTTCAGTGGCAGAGGAGGGGCCGAATGTTTCCGCCAGTGCGGTTGTGGAGACGGTGGCAGTTACGACTGAGGAAAGCGGAGAGAGGAGGAGGAGGTACAGAGGAGTGAGGCAGAGGCCGTGGGGTAAATGGGCAGCAGAAATTCGGGATCCTCACAAGGCGGCGAGAGTCTGGCTTGGGACATTCGACACGGCGGAGGCGGCCGCCAAAGCTTACGATGATGCCGCATTGAGATTCCGGGGTAACAGAGCCAAACTAAATTTCCCTGAAAACGTCAGAGCTGTGCCCCCTGTTCACAACTTTCCGGCCACTCCCCTTACCGTAACCGATTCCACAGCCACTCATTTTCAGCAACATACTCCTAATCTTCCCCCTCCACCACCACCTCCTCCGCAGCAGCCACCATTCTTGCAGTCGCCGTCTTTTCAGGTGCCATCGCACTTGATCAGAGACTACTGGGAATACTCTCAACTGCTTCAAAGCTCCGATGATTTCCAACAGCAGCAGCAAAATCAGCAACAGCAACAACATAATTCAAATTTATTGCAACAATGGCTCTATAGTTCACAATTGGCTGCTCTTCAATCGTCTTCTATGTTATTGTCATCTTCACCTCTGTCTTCATCTTCTTCACCAACAGCATTCTCACCATCGAGACAGCTATCCTCTGCTTCATATCCCCTGTTTTCTAGCCAGCAAGGAGGCTACTACCGACCATCACCGGGAAACCAACAGCCCGGCGGCAGTGGTGGAAACATCGGCGGTGGTTCAGGCTTTCCGGCAACAACTTGGTCAGATACCAGTGGCTACCCTCCTCCTCCATCCGGTTCTGGCTGA 1317 0.5232 MLVSLTQIITRKHRHVAEFSRFTGHDGAADEEESLNPSAAAVAAAGEDEEEKEGVFSGYSSNKEGELTAMVSALTHVVSGSGGQGRTEWIPVMTSPGQPSPSSSVLSPYLSSSSSSSLSSASGSASGSTVSWVGHKRARDQHSSVYGSFSEFRVPSQGQSSSVAEEGPNVSASAVVETVAVTTEESGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAAKAYDDAALRFRGNRAKLNFPENVRAVPPVHNFPATPLTVTDSTATHFQQHTPNLPPPPPPPPQQPPFLQSPSFQVPSHLIRDYWEYSQLLQSSDDFQQQQQNQQQQQHNSNLLQQWLYSSQLAALQSSSMLLSSSPLSSSSSPTAFSPSRQLSSASYPLFSSQQGGYYRPSPGNQQPGGSGGNIGGGSGFPATTWSDTSGYPPPPSGSG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2998 438 MobiDBLite consensus disorder prediction 27 59 - -
Acco02g2998 438 MobiDBLite consensus disorder prediction 91 111 - -
Acco02g2998 438 CDD AP2 200 251 IPR001471 GO:0003700|GO:0006355
Acco02g2998 438 MobiDBLite consensus disorder prediction 280 298 - -
Acco02g2998 438 FunFam Ethylene-responsive transcription factor 2 191 250 - -
Acco02g2998 438 SMART rav1_2 192 255 IPR001471 GO:0003700|GO:0006355
Acco02g2998 438 SUPERFAMILY DNA-binding domain 192 250 IPR016177 GO:0003677
Acco02g2998 438 MobiDBLite consensus disorder prediction 78 111 - -
Acco02g2998 438 PANTHER DNA-BINDING DOMAIN 141 341 IPR044808 GO:0003700|GO:0009873
Acco02g2998 438 MobiDBLite consensus disorder prediction 272 301 - -
Acco02g2998 438 Gene3D AP2/ERF domain 191 251 IPR036955 GO:0003700|GO:0006355
Acco02g2998 438 ProSiteProfiles AP2/ERF domain profile. 192 249 IPR001471 GO:0003700|GO:0006355
Acco02g2998 438 Pfam AP2 domain 192 241 IPR001471 GO:0003700|GO:0006355
Acco02g2998 438 MobiDBLite consensus disorder prediction 361 438 - -
Acco02g2998 438 PRINTS Ethylene responsive element binding protein signature 193 204 IPR001471 GO:0003700|GO:0006355
Acco02g2998 438 PRINTS Ethylene responsive element binding protein signature 215 231 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2998 Acco-ChrAcco02 38568490 38570653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2998 184 270 AP2-EREBP Transcription Factor Family AT2G33710 70.115 1.85e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g2998 AP2 4.7e-14 CL0081