Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2990 ATGGTGAAATCTTTTCCCCAATATAATCGCGTACTAGGGTTTCCAGTGCAGCTTCTTTGCTCTGGCACACCACTTCGCCGCAGAAGCAACCTCAGGAGGAGAACGATGTCGCACAGGAAGTTCGAGCACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCCCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAGGCTTACTGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTAAGAGAGGTCGAGAAACCAGGGTCAAAACTTCACAAGAAGGAAACCTGTGAACCTGTTACAATTATTGAGACTCCTCCAATGGTTATTGTTGGAGTTGTAGGTTATGTGAAAACTCCCCGTGGCCTTCGCACATTGGGCACTGTATGGGCTCAGCATTTAAGTGAGGATGTGAAGCGCAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCTCAAAGTACTCCAAGCAGTATGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCTCAGCTTGAGAAAATCAAGAAGTATGCATCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGTTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCCGAGAAGGTGGACTATGCGTACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCCATATTCCAGAAGGATGAGATGATTGATCTCATCGGTGTTACAAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACCCGCCTTCCCCGCAAGACTCACAGGGGTTTGAGGAAAGTTGCTTGTATTGGCGCCTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGAGATGAGTCTCACACTGCTGTCACCGATTTTGACAGGACTGAGAAGGACGTTACTCCAATGGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATTTGATGATCAAGGGATGCTGTGTTGGTCCGAAGAAAAGGGTTATCACGTTGCGCCAATCCCTCCTTAAGCAGACATCTCGTGTTTCTCTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACTACACAGGAAAAACAAAAGTTCTTTGGACGTCTCAAGGCTTAA 1275 0.4776 MVKSFPQYNRVLGFPVQLLCSGTPLRRRSNLRRRTMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEDVKRRFYKNWCKSKKKAFSKYSKQYESEEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYNFFEKQVPVDAIFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTAVTDFDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVITLRQSLLKQTSRVSLEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2990 424 FunFam 60S ribosomal protein L3 79 202 - -
Acco02g2990 424 FunFam 60S ribosomal protein L3 36 109 - -
Acco02g2990 424 Pfam Ribosomal protein L3 36 405 IPR000597 GO:0003735|GO:0005840|GO:0006412
Acco02g2990 424 FunFam Ribosomal protein L3 300 424 - -
Acco02g2990 424 SUPERFAMILY Translation proteins 39 405 IPR009000 -
Acco02g2990 424 Gene3D Translation factors 79 420 - -
Acco02g2990 424 FunFam 60S ribosomal protein L3 118 242 - -
Acco02g2990 424 FunFam 60S ribosomal protein L3 261 309 - -
Acco02g2990 424 Gene3D Ribosomal protein L3, domain 3 36 309 IPR044892 -
Acco02g2990 424 ProSitePatterns Ribosomal protein L3 signature. 247 270 IPR019926 -
Acco02g2990 424 Gene3D - 118 242 - -
Acco02g2990 424 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 36 419 IPR045077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2990 Acco-ChrAcco02 38155941 38159460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2990 36 422 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.271 0.0 694