Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2989 ATGCATTCCCGGTTTCCAGTGCAGCTTCTTTGCTCTGGCACACCACTTCGCCGCAGAAGCAACCTCAGGAGGAGAACGATGTCGCACAGGAAGTTCGAGCACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCCCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAGGCTTACTGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTAAGAGAGGTCGAGAAACCAGGGTCAAAACTTCACAAGAAGGAAACCTGTGAACCTGTTACAATTATTGAGACTCCTCCAATGGTTATTGTTGGAGTTGTAGGTTATGTGAAAACTCCCCGTGGCCTTCGCACATTGGGCACTGTATGGGCTCAGCATTTAAGTGAGGATGTGAAGCGCAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCTCAAAGTACTCCAAGCAGTATGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCTCAGCTTGAGAAAATCAAGAAGTATGCATCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGTTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCCGAGAAGGTGGACTATGCGTACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCCATATTCCAGAAGGATGAGATGATTGATCTCATCGGTGTTACAAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACCCGCCTTCCCCGCAAGACTCACAGGGGTTTGAGGAAAGTTGCTTGTATTGGCGCCTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGAGATGAGTCTCACACTGCTGTCACCGATTTTGACAGGACTGAGAAGGACGTTACTCCAATGGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATTTGATGATCAAGGGATGCTGTGTTGGTCCGAAGAAAAGGGTTATCACGTTGCGCCAATCCCTCCTTAAGCAGACATCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAAGAGAAACAAAAGTTCTTTGGACGTCTCAAGGCGTAA 1248 0.4824 MHSRFPVQLLCSGTPLRRRSNLRRRTMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEDVKRRFYKNWCKSKKKAFSKYSKQYESEEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYNFFEKQVPVDAIFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTAVTDFDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2989 415 SUPERFAMILY Translation proteins 30 396 IPR009000 -
Acco02g2989 415 ProSitePatterns Ribosomal protein L3 signature. 238 261 IPR019926 -
Acco02g2989 415 Gene3D Ribosomal protein L3, domain 3 27 300 IPR044892 -
Acco02g2989 415 FunFam Ribosomal protein L3 291 415 - -
Acco02g2989 415 FunFam 60S ribosomal protein L3 252 300 - -
Acco02g2989 415 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 27 410 IPR045077 GO:0003735|GO:0005840|GO:0006412
Acco02g2989 415 FunFam 60S ribosomal protein L3 27 100 - -
Acco02g2989 415 Pfam Ribosomal protein L3 27 396 IPR000597 GO:0003735|GO:0005840|GO:0006412
Acco02g2989 415 FunFam 60S ribosomal protein L3 70 185 - -
Acco02g2989 415 FunFam 60S ribosomal protein L3 109 233 - -
Acco02g2989 415 Gene3D - 109 233 - -
Acco02g2989 415 Gene3D Translation factors 70 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2989 Acco-ChrAcco02 38132845 38135849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2989 27 413 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.530 0.0 694