Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2953 ATGGTGATGATGCAGCTCGGGGAGCCGACCACTGTCGTATTGGGGATGGTCGCTAAGGCGGCCGCAGCCGAAGAACCACCTCCTCCTCCTCCGCCACCCGAAACGGTGGAGGAGCCAGATGGAGCTGGCGAGATCATAATTGGGATGGATAAAGCAGCAGCAACAACAACTTCATCTGGTGAAGGTGACAATAAGATGAAAAGTGGAGGGAACCGGTGGCCCCGCCAAGAGACTTTGGCTCTGTTGAAGATAAGGTCTGATATGGATTCTGTGTTTCGAGATTCAAGTCTTAAAGGTCCACTCTGGGAAGAAGTTTCAAGGAAGCTGGGAGAGCTTGGTTATCAGAGAAGTGCAAAGAAGTGCAAGGAGAAATTTGAGAACGTGTATAAGTACCACAAGAGAACCAAAGATGGCAGAAATGCCAAACCAGAAGGAAAGACCAAAACCTATAGATTTTTTGATGAATTAGAAGCTTTTGAATCTCGACTCACTCATTCACATCATTCTCAAGTTCAATCTCAATCTCATCATCCTCCAAAATCGTTATCTCAGCCTTCTAATTTGCCTCCAAATACACTTACCTCGTTGCCATCAACTACTTTCTCTTACGTCACCGGTGTGACGACTACTACTACTATTAATATGAATGTTCCATCTTTGAATAACCATCCGGGGGTGGTGAATGCGGCGAACCTTTCAACATCGACCTCGTCGTCCACGGACTCCGACGAGGACCTGGAGGAGAGGTACAGGAAGAAGAGGAAGTGGAAGGACTACTTTAGGAAGCTCACAAGGCGAGTGCTGGCTAGACAGGAGGAGATGCAGAGGAGGTTTTTGGACGCCATTGACAAACAAGAGCGCGAGCGTGTGACTCGGCAGGAAGCTTGGAGGATTCAAGAGATGGCTCGGATCAACCGCGAGCACGAAATCCTCGTTCAAGAAAGATCCACCGCCGCCTCCAAGGATGCCGCCATTATTGCATTCTTACAGAAGTTGTCCGGCGGATCACAGCAGCCTCCTCCTCCTACGGCGAAAACGCCACCAGTGTCGGTGGTGTCACAGTTTCAACCGCAGCCACAACCACAACAACAACAAAACCAGCAGCAGCCGCAGTTGGTAGTGATGATGCCGAGTAACAAAATTAGCTACGAAAAGTTTGAAATCCAGAAAATGAATAACAGCAATCGCAACATCGACGGCAGTAGTGGTGGCGGCGGCGCTTCTTTGCGGTGGCCAACTGCGGAGGTACATGCGCTGATAAGGCTGAGGACAAGCCTGGAGGCGAAGTACCAGGGGAACGGTCCTAAGGCTCCACTGTGGGAGGAAATATCAAGTGAGATGCAGAAATTGGGGTACAAAAGGATTGCCAAGAGGTGCAAGGAGAAGTGGGAGAACATTAACAAGTACTTCAAGAAGATCAAAGAAAGCAACAAACAAATGCGTGAGGATAGCAAGACTTGTCCTTACTACAAAGAGCTCGATGCTTTGTACAAAGAAAAGACCAAACACTGTAACAACAACCTCTTCGGTAATTCGTTTGGTCACAATGTGGAGCCAATAATGGTCCAGCCAGAGCAGCAATGGAGGCCTCCAACTCAAGAAGAAGAAGCCGCAAGTCGTCAGTATCAAGAATGTGAAGAAGACGATGACGAAGACTATGAGGAAGACGTAGGTGGGATTGAAGAAGAAGACCGAGGAAGTATCGACTTAGAAGATGAAGAAGAAGGTGGTGGTCACGGTGATTATGAGAATAATAACTCAAAAAATAAACTTTCTTCAGTGGAGACAGTTCAATGA 1797 0.4786 MVMMQLGEPTTVVLGMVAKAAAAEEPPPPPPPPETVEEPDGAGEIIIGMDKAAATTTSSGEGDNKMKSGGNRWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLGELGYQRSAKKCKEKFENVYKYHKRTKDGRNAKPEGKTKTYRFFDELEAFESRLTHSHHSQVQSQSHHPPKSLSQPSNLPPNTLTSLPSTTFSYVTGVTTTTTINMNVPSLNNHPGVVNAANLSTSTSSSTDSDEDLEERYRKKRKWKDYFRKLTRRVLARQEEMQRRFLDAIDKQERERVTRQEAWRIQEMARINREHEILVQERSTAASKDAAIIAFLQKLSGGSQQPPPPTAKTPPVSVVSQFQPQPQPQQQQNQQQPQLVVMMPSNKISYEKFEIQKMNNSNRNIDGSSGGGGASLRWPTAEVHALIRLRTSLEAKYQGNGPKAPLWEEISSEMQKLGYKRIAKRCKEKWENINKYFKKIKESNKQMREDSKTCPYYKELDALYKEKTKHCNNNLFGNSFGHNVEPIMVQPEQQWRPPTQEEEAASRQYQECEEDDDEDYEEDVGGIEEEDRGSIDLEDEEEGGGHGDYENNNSKNKLSSVETVQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2953 598 PANTHER FI21293P1 34 541 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 18 72 - -
Acco02g2953 598 SMART sant 69 131 IPR001005 -
Acco02g2953 598 SMART sant 407 469 IPR001005 -
Acco02g2953 598 ProSiteProfiles Myb-like domain profile. 65 129 IPR001005 -
Acco02g2953 598 MobiDBLite consensus disorder prediction 541 578 - -
Acco02g2953 598 CDD GT1 410 474 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 526 598 - -
Acco02g2953 598 ProSiteProfiles Myb-like domain profile. 410 467 IPR001005 -
Acco02g2953 598 Coils Coil 268 288 - -
Acco02g2953 598 Pfam Myb/SANT-like DNA-binding domain 410 496 IPR044822 -
Acco02g2953 598 Pfam Myb/SANT-like DNA-binding domain 71 158 IPR044822 -
Acco02g2953 598 MobiDBLite consensus disorder prediction 582 598 - -
Acco02g2953 598 FunFam Trihelix transcription factor GT-2 73 134 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 165 194 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 23 37 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 348 371 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 333 371 - -
Acco02g2953 598 FunFam Trihelix transcription factor GT-2 411 472 - -
Acco02g2953 598 CDD GT1 71 136 - -
Acco02g2953 598 Gene3D - 411 472 - -
Acco02g2953 598 Gene3D - 73 134 - -
Acco02g2953 598 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2953 Acco-ChrAcco02 36834235 36836623 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2953 69 528 Trihelix Transcription Factor Family AT1G76880 50.104 9.78e-129 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco02g2953 Myb_DNA-bind_4 1.4e-20 CL0123