Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2950 ATGCTGGGGGACTCATCATCGGCTACACTGGGTGGCGGTGGAGGAGGAGGGAGCGGTGGTGGTGGTAACTCTTCTGATGCAGTGGCGCCGACAGTCGTGGCTGCAGGGACGTCTTCGCATGACGGTGGCGAGTGGACTGTGGCGGCCGTGGCGGCTGCTGCAGCCGCTGGATCGAACTCTGGGGAGGAAGATGTGAGGGGAAGAGGGGAAGAAGGTGACCGGAGCTTCGGTGGCAACCGGTGGCCGAGGCAAGAGACTTTGGCGCTCTTGAAAATGCGCTCCGATATGGACGTAGCGTTTCGAGATGCTAGCGTTAAAGGTCCTCTCTGGGAAGAAGTTTCCAGGAAAATGGCAGAGCTTGGGTATGACAGAAGCGCCAAGAAATGCAAAGAGAAATTCGAGAACCTGTATAAGTACCACAAGAGAACAAAAGATGGCCGAACTGGGAAATCTGAAGGCAAAACGTATCGTTTCTTTGATCAATTAGAAGCTCTTGATCATCAAAACCATACTCCTCCTACAATTCAATCCTCACAACAGCCACCGCAAGCACCACCGTCAAAGCCCCCGTCGTCTCAGTTTATGGCAATACCTGCAACACCAGTTTCAGTGGTGGTGACGACGACAAATCCTCCTCCTCATCTCTCTACGGTTCCATCAACGATCACACCTCAACCCAACAATGCTCTAACTCCAGCTATGAACCTCACTTCTTCCGCCATTAATAACAATCCTCCACCTTTCTACAATATTTTCCCACGTCCGCTACCACCGTCAACATCAGCCGCAAATCCTATCCAATCTTCTTTCGCGGCTGACCTCTTGTCTAATTCACCATCTTCCTCGACTTCCTCAGACGAGTCATTAGAGCGGCGGCAGCGGCGGAAGCGGAAGTGGAAGGACTTCTTTGGAAGGCTGACGAAGGAGGTGATAGAGAAGCAGGAGCAAATGCAGAAGAGGTTATTGGAGGCCATTGAGAAGCGAGAACATGAAAGGATGGTTCGTGAAGAAGCTTGCAGAATGCAAGAAATGGCGAGGATTAATCGAGAGCGTGAAATATTGGCACAGGATAGATCTTTAGCGGCTGCCAAAGATGCTGCTGTAATGGCACTATTGCAGAAGATTGCCGAACAGCAAAATCTCGGCCTCCCATTGAATAATATCACCATTTCTCCTCCTCCACCACCGCCACCGATGGCTCAACCAACAACACAACCAGCATCAGCTCCGGTGGCGACTCCGGCTCTTCCTCCTGCTCAACCACAGCAGATCAGTTCAGTGACAAACATGGAGATTGGAGCAACTGATAATAATAACAATAATGGGGAGAATTTAATGACGCCGAGCTCGTCAAGGTGGCCAAAAGTGGAGGTTCAGGCATTGATAAAGCTAAGAACGATCATGGACGAGAAGTACCAAGAGAATGGGCCAAAAGGGCCGTTGTGGGAGGAGATCTCGGAGGCGATGAGGCGGCTCGGGTATTGCAGAAACGCCAAGAGGTGTAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGTGAAGGAAAGCAACAAGAAGAGGCCTGAAGATTCCAAGACCTGTCCGTATTTCCACCAGCTAGATGCTCTATACAGGGAGAAGAACAAGCATGACATGATCAATACTCCTCCTCCGACTGCAGCCATCGCCACTGCGAATCATAATCTGAATCTGGCGGATAATAATAGCGCAATGCCGACATCGGTGCCGGCGCTGATGGTTCAGCCAGAGCAGCAATGGCCTCCGCAGCAAGAAAACTACAACAAAAATGCAGAGTTGGAGGAGGAGGAAGAAGACGACATGGACGGAGAGAAGGATATTGAAGACGAAGATGAAGAAGAAGAAGACGAAGAAGCGGAAGGAGTGGGAAATTATGAGATAGTAGCAAGCAAGCCAGCTTCAGTGAGTGCAGCTGAGTGA 1944 0.5051 MLGDSSSATLGGGGGGGSGGGGNSSDAVAPTVVAAGTSSHDGGEWTVAAVAAAAAAGSNSGEEDVRGRGEEGDRSFGGNRWPRQETLALLKMRSDMDVAFRDASVKGPLWEEVSRKMAELGYDRSAKKCKEKFENLYKYHKRTKDGRTGKSEGKTYRFFDQLEALDHQNHTPPTIQSSQQPPQAPPSKPPSSQFMAIPATPVSVVVTTTNPPPHLSTVPSTITPQPNNALTPAMNLTSSAINNNPPPFYNIFPRPLPPSTSAANPIQSSFAADLLSNSPSSSTSSDESLERRQRRKRKWKDFFGRLTKEVIEKQEQMQKRLLEAIEKREHERMVREEACRMQEMARINREREILAQDRSLAAAKDAAVMALLQKIAEQQNLGLPLNNITISPPPPPPPMAQPTTQPASAPVATPALPPAQPQQISSVTNMEIGATDNNNNNGENLMTPSSSRWPKVEVQALIKLRTIMDEKYQENGPKGPLWEEISEAMRRLGYCRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKHDMINTPPPTAAIATANHNLNLADNNSAMPTSVPALMVQPEQQWPPQQENYNKNAELEEEEEDDMDGEKDIEDEDEEEEDEEAEGVGNYEIVASKPASVSAAE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2950 647 FunFam Trihelix transcription factor GT-2 81 142 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 63 78 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 178 192 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 193 233 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 168 233 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 599 630 - -
Acco02g2950 647 Coils Coil 311 331 - -
Acco02g2950 647 PANTHER FI21293P1 54 606 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 272 295 - -
Acco02g2950 647 CDD GT1 451 516 - -
Acco02g2950 647 SMART sant 449 511 IPR001005 -
Acco02g2950 647 SMART sant 77 139 IPR001005 -
Acco02g2950 647 Coils Coil 601 621 - -
Acco02g2950 647 Gene3D - 81 142 - -
Acco02g2950 647 Gene3D - 453 514 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 56 80 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 391 421 - -
Acco02g2950 647 ProSiteProfiles Myb-like domain profile. 451 509 IPR001005 -
Acco02g2950 647 MobiDBLite consensus disorder prediction 272 286 - -
Acco02g2950 647 MobiDBLite consensus disorder prediction 586 647 - -
Acco02g2950 647 FunFam Trihelix transcription factor GT-2 453 514 - -
Acco02g2950 647 CDD GT1 79 144 - -
Acco02g2950 647 Pfam Myb/SANT-like DNA-binding domain 79 165 IPR044822 -
Acco02g2950 647 Pfam Myb/SANT-like DNA-binding domain 451 538 IPR044822 -
Acco02g2950 647 ProSiteProfiles Myb-like domain profile. 79 137 IPR001005 -
Acco02g2950 647 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2950 Acco-ChrAcco02 36717055 36719904 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2950 70 588 Trihelix Transcription Factor Family AT1G76880 52.581 2.98e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco02g2950 Myb_DNA-bind_4 3.2e-21 CL0123