Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2938 ATGGATCCCTTCATGGTGTCGTCAACCACCAGTGTGCTAACGCCAGCCGTGGAAGTTGGACAGGGGTCCGGGATTCCCCAGGTTGGGTCCCACGACTCTAGTACCCCCTCTGGCAGCAACTCTAGAGTTACCAGCTATAATGACCTGGCTCGGTTCGACCCTTTTGACATCGACTTTATCGATAGCCCTCCGCTGCTTCCTGATGCTACGATTGACCACACCATTGCCTTTTTGCCGGAGGAATTGGGCTACCTGAACCCCGGGCCAAGCATGCCAGAGGGGTCCCTTGGGGGCCATATCCAGAGCTGGTCTATGGATTCCGATCTCCTGGACTACATTGAAGACAGCGAAGGCTTCGCCGGAGCCACCGATGATCTGGGTGGGAACGATGCTCTGCCAGCGAACCTAGTGGTGCATCAGGCGCAGGGCGTTTGCATGGATGGTTCAACCCATACTGTGTCGACTGAAACTGAGCAGCCTATGGCGAATGAAGCTGTGAAGAAAGCAATGCCCAATGAGAAGCTCGCTGAACTAGCTGTGATAGATCCCAAGCGAGCTAAGAGGATTATTGCTAATAGGGAATCTGCTGCTCGTTCAAAGGAGAGGAAGATTCGTCACACAGTAGAGCTAGAGAAGAAGGTGGACATACTTCAGGCTGACTCAGCTGAGATCTGTGTGAAGGTTGAGAAAATTCAGAAGGAAAATTTGGACTTGAAAGCTGAGAAGAAGGATATCATATATTATGTAGAGTCTATCGATGGAGAAGCAAAGTATATGAAGATTCTTGACGTGAATCCACTAATTCATCTCTTTACTGCAGAACTGAACCGAACTTTAAGGGATAAGCTGAGGGTACTAAAGAAGGAATATAAACAAAAAGTTGCATATAAGCGTGTATATCACAGAAGTATGGTCTCTCATTTTTCTTCTCACCTAGCAGTGTATCAGGTGAAGCTTCTTCGATCTTGGCAGGGTCAGCAGAAACTTGGCATGCCTCCGTCGTGCTCAGATCAGCCTGACAACTCGGAGTTGGATTCGGATGAACTGAGTTCTGACTCAGAAAATTAG 1068 0.4869 MDPFMVSSTTSVLTPAVEVGQGSGIPQVGSHDSSTPSGSNSRVTSYNDLARFDPFDIDFIDSPPLLPDATIDHTIAFLPEELGYLNPGPSMPEGSLGGHIQSWSMDSDLLDYIEDSEGFAGATDDLGGNDALPANLVVHQAQGVCMDGSTHTVSTETEQPMANEAVKKAMPNEKLAELAVIDPKRAKRIIANRESAARSKERKIRHTVELEKKVDILQADSAEICVKVEKIQKENLDLKAEKKDIIYYVESIDGEAKYMKILDVNPLIHLFTAELNRTLRDKLRVLKKEYKQKVAYKRVYHRSMVSHFSSHLAVYQVKLLRSWQGQQKLGMPPSCSDQPDNSELDSDELSSDSEN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2938 355 MobiDBLite consensus disorder prediction 341 355 - -
Acco02g2938 355 MobiDBLite consensus disorder prediction 328 355 - -
Acco02g2938 355 Pfam bZIP transcription factor 184 242 IPR004827 GO:0003700|GO:0006355
Acco02g2938 355 MobiDBLite consensus disorder prediction 20 42 - -
Acco02g2938 355 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 93 328 - -
Acco02g2938 355 Gene3D - 183 245 - -
Acco02g2938 355 CDD bZIP_plant_RF2 185 235 IPR044759 GO:0003700|GO:0006355
Acco02g2938 355 SUPERFAMILY Leucine zipper domain 184 239 IPR046347 GO:0003700|GO:0006355
Acco02g2938 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Acco02g2938 355 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Acco02g2938 355 MobiDBLite consensus disorder prediction 26 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2938 Acco-ChrAcco02 36136377 36140218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2938 45 287 bZIP Transcription Factor Family AT1G43700 33.962 4.49e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco02g2938 bZIP_1 6.8e-08 CL0018