Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2903 ATGGAGCAGAAGCACGTTTTGTTGTCAGCATTGAGCCTAGGACTCGGTGTGGGAGTGGGGCTTGGATTGAGTTCAGGGCAGGTGCTTCAGAAATGGGTCGGATGGAATCCAACGGTTTGCGGTGAGCAGATTGAGCAGGAGCTTTTCAGGCTCCTCATTGATGGCAACGAATGCAAGGAAACTCTTGAACACTTTCCTTATTACTTAAGCGAAAGAACTTGTGAGTTATTGACGAGTGCTGCTTTTGTTCATTTAAAACAAAACTTCTCCAAACACACCCGTAACCTTTCACCAGCAAGCAGGACAATTCTACTTTCTGGACCTGCAGAACTTTACCTTCAAATACTTGCCAAGGCTTTAGCACATCACTTTGAGTCAAAGTTGCTGCTGCTTGACATTGTCGACCTCTCTTTCAAGATGCAAAGCAAATATGGATATGCAAGAAAAGAATCTTCTTTTCAAAGGTCCTTCTCTGAGGTGACTCTCGAGCGAGTGTCCTGCTTTTTTGGTTCCTTTTCAGTTCTCCCTTCAACTGGAAAAATCAAAGGCACTTTCTCCACTCATGGTAATAGTACTGGTAGTTCAAATACATATTCAAAACTTAGTAGGAGTTCCTCTGCTGCATCTGATATGAGTAGCTCTGCCTCCCAATGTGGTCAAACAAATTCAGGTCCCTTGAAGCATACAAGCAGCTTGGGTTTTGATGAAAAACTCTTTCTACAATTGCTGTACAAGGTCTTGGTTTCTGTCTCAGAAAAAAGTTCCTTAATTTTATACATCAGGGATGCTGACAAGATTTTCCTCCAATCAGAACGGCTATATAATTTGTTTCATAAAATGATTGAGAAACTTTCAGGGCCAGTGTTGGTACTTGGTTCCCAGATATTAGATTCAAAAGATGAATGCTTGGAAGTTGATGAAAGGCTTGCAACATTATTTCCTTACAACATTGAGATTAAACCACCTGAAGATGATATTAGTCTTGGAAACTGGAAGGTCCAATTGGAAGAGAACATGAAAATTATTCAGTTTCAAGATAACAAAAAACACATTGCTGAAGTACTTGCGGCAAATGACATTGAATGTAACGACTTGAATTCAATCTGCCGTGCAGACACAATGGTACTAAGTAATTATATTGAAGAAATTGTAGTATCTGCAATACGTTACCACTTGATGAAAACCAAGGATCCCGAATACCGAAATGGGAAGCTAGTATTATCATCCGAGAGTTTGTCCCATGGTCTGAATCTGTTTCAAGTAGGAAAAAGTACTGTTGAGGATACCCTGAAGCTGGAGACTAATGGAAACAAAGACTCAGCTGTCGGAAAGCGTAATGGTGCAAAACATGAGGTACGGTTTGACACTCAAGCACCTGAAAATAAAAGTGAGACAGAGAGATCTCTTCCTCTAACAAAGAGTGATGGAGAGAATTCTGCTCCAAAAGCAGCTGAAGTTCCTCCTGACAACGAGTTTGAGAAGCGCATTAGACCTGAGGTCATCCCTGCAAATGAGATCGGAGTTACATTTGGAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTAGTTATGCTTCCCCTTCGAAGGCCAGATTTCTTTAGAGGTGGACTTCTTAAGCCTTGCAGAGGTATATTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCTAAGGCAATTGCAAATGAAGTTGGAGCAAGCTTTGTCAATGTCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAAAATATCCGAGCTCTCTTCACGTTGGCAGCAAAGGTTGCCCCAACTATTATTTTTGTTGATGAGGTTGACGGCATGCTCGGTCAGCGCACAAGAGTTGGAGAACATGAGGCTATGAGAAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTATTGACAAAACCCGCAGAGCAAATTCTTGTCCTCGCTGCAACAAACAGGCCATTTGACCTTGATGAAGCAATCATACGGCGGTTTGAGCGAAGAATCATGGTCGGCCTTCCATCTGTTGAGAGCAGGGAAATTATCTTGAAGACTCTACTGGCTAAGGAAAAGACTGAAAATTTTGACTTCAAAGAGCTTGCTGTCATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTGTGCACAACTGCTGCTTATCGACCTTTTAGGGAGTTCATAAAGCAGGAGAAATTGAAAAATATGGATAAGAATAAAAAAGTGGCAGGAGAACAAAGCTCAGAGGATGCTTCAGATGCTATGGAGGGTGGAGAAGAGCAAGTAATTACCTTGAGGGCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTCTTGCTGCTGAAGGATCAATAATGGCTGAGCTGAAGCAGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGAAAGAAGCAGCAACTCACTTACTTCCTTTAG 2469 0.4164 MEQKHVLLSALSLGLGVGVGLGLSSGQVLQKWVGWNPTVCGEQIEQELFRLLIDGNECKETLEHFPYYLSERTCELLTSAAFVHLKQNFSKHTRNLSPASRTILLSGPAELYLQILAKALAHHFESKLLLLDIVDLSFKMQSKYGYARKESSFQRSFSEVTLERVSCFFGSFSVLPSTGKIKGTFSTHGNSTGSSNTYSKLSRSSSAASDMSSSASQCGQTNSGPLKHTSSLGFDEKLFLQLLYKVLVSVSEKSSLILYIRDADKIFLQSERLYNLFHKMIEKLSGPVLVLGSQILDSKDECLEVDERLATLFPYNIEIKPPEDDISLGNWKVQLEENMKIIQFQDNKKHIAEVLAANDIECNDLNSICRADTMVLSNYIEEIVVSAIRYHLMKTKDPEYRNGKLVLSSESLSHGLNLFQVGKSTVEDTLKLETNGNKDSAVGKRNGAKHEVRFDTQAPENKSETERSLPLTKSDGENSAPKAAEVPPDNEFEKRIRPEVIPANEIGVTFGDIGALDEIKESLQELVMLPLRRPDFFRGGLLKPCRGILLFGPPGTGKTMLAKAIANEVGASFVNVSMSTITSKWFGEDEKNIRALFTLAAKVAPTIIFVDEVDGMLGQRTRVGEHEAMRKIKNEFMMHWDGLLTKPAEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREIILKTLLAKEKTENFDFKELAVMTEGYSGSDLKNLCTTAAYRPFREFIKQEKLKNMDKNKKVAGEQSSEDASDAMEGGEEQVITLRALNMEDMRQAKSQVAASLAAEGSIMAELKQWNELYGEGGSRKKQQLTYFL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2903 822 Gene3D - 680 762 - -
Acco02g2903 822 MobiDBLite consensus disorder prediction 443 471 - -
Acco02g2903 822 Gene3D - 507 763 IPR027417 -
Acco02g2903 822 ProSitePatterns AAA-protein family signature. 651 670 IPR003960 GO:0005524|GO:0016887
Acco02g2903 822 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 821 - -
Acco02g2903 822 SMART AAA_5 544 681 IPR003593 GO:0016887
Acco02g2903 822 MobiDBLite consensus disorder prediction 434 493 - -
Acco02g2903 822 MobiDBLite consensus disorder prediction 744 763 - -
Acco02g2903 822 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 507 682 - -
Acco02g2903 822 Pfam AAA+ lid domain 700 742 IPR041569 -
Acco02g2903 822 Pfam ATPase family associated with various cellular activities (AAA) 548 678 IPR003959 GO:0005524|GO:0016887
Acco02g2903 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 726 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2903 Acco-ChrAcco02 34608933 34615409 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2903 508 739 Calmodulin-binding Proteins AT3G56690 37.288 3.62e-40 158