Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2881 ATGGGGAAGCCAAGTAGAACACAGACTCTTCTCTGTTTCATGGTACTTGTTGTCTGGTTTTCTTGTTCTTCTTCTGCAAATGCTTTTCTCTCTCCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTTGTTGATCCTCATGTAGTTTTAGATACTTGGGATGGAGATTTTGTTTATCCTTGTAGCTGGACCATGGTCACTTGTTCTTCAGACAACCTTGTTGTTAGCCTGGGCACTCCGAGTCAAAGTTTATCTGGTACTTTGTCTCCCACCATAGGAAACCTCACAAACCTTCAAACTCTGTTGTTACAGAATAACAACGCAACAGGTACAATTCCTTTAGAATTAGGGAAGCTTTCAAAGTTGCAGACTTTAGAACTGTCAAATAACTTGTTCAATGGGGAAATTCCTGCCTCTTTAGGCCACATGAGCAAGCTGCGATACTTGAGGCTCAATAATAATAGTCTTTCGGGTGAATGTCTAGAGTCACTGTCCAAGATGACACGGTTTGCTTTCCTCCTTGTTGGAAATCCCCTCATCTGTAGTACTGGGAAAGAAGAAACCTGCCATGGGATGACACTTATGCCTATGTCCATGAACTTAAACAATACCCAACAAGATCGTCATCATGAGGAAGTGTATCTGGGGAACTTGAAGAGGTTCCATTTCAGAGAGCTGCAGATAGCTACAAACAATTTCAGCAACAAGAACATATTAGGAAAAGGCGGGGTTCAGACACGTGTACAAGGGAGTTCTTCAAGGTGGGACAGTGGTGGCAGTGAAGAGGCTAAGAGATGGGAATGCCATTGGAGGAGAAATACAGTTTCAGTACATAGAAACCTCCTCAAACTCTATGGTTTCTGTATGACTCCCTCCGAAAGGCTTCTTATTTACCCTTACATGACTAATGGTAGTGTTGCTTCTCGCCTCAAAGCAAAGCTTTTGGATCATCAAGACTCTCATGTGAACACTGCTGTGAGGGGCACTGTGGGCCACATTGCCCCTGAGTACCTCTCCACAGGGCAGTCCTCTGAGAAGACTGATGTCTTTGGATTTGGTATTCTCCTCCTTGAGTTGATCACTGGTCTTAGGGCACTTGACTTTGGAAAAGTTGCCAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAGATTCATCAAGAGAAGAAGCTTGAGCTACTAGTGGACACGGATTTGAAGAGCAACTATGATAGAATAGAGCTAGAAGAAGTGGTGAAAGTGGCACTTCTTAGTACTCAATACCTACCAGGACAAAGACAACTAGTGAGAATGCTCAGGAGACGGACTTGCAGAAAGGTGGGAAGCTTCTCAAAGCAAAGATCATAA 1365 0.4344 MGKPSRTQTLLCFMVLVVWFSCSSSANAFLSPKGVNFEVQALMGIKASLVDPHVVLDTWDGDFVYPCSWTMVTCSSDNLVVSLGTPSQSLSGTLSPTIGNLTNLQTLLLQNNNATGTIPLELGKLSKLQTLELSNNLFNGEIPASLGHMSKLRYLRLNNNSLSGECLESLSKMTRFAFLLVGNPLICSTGKEETCHGMTLMPMSMNLNNTQQDRHHEEVYLGNLKRFHFRELQIATNNFSNKNILGKGGVQTRVQGSSSRWDSGGSEEAKRWECHWRRNTVSVHRNLLKLYGFCMTPSERLLIYPYMTNGSVASRLKAKLLDHQDSHVNTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKVANQKGAMLDWVKKIHQEKKLELLVDTDLKSNYDRIELEEVVKVALLSTQYLPGQRQLVRMLRRRTCRKVGSFSKQRS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2881 454 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Acco02g2881 454 SMART serkin_6 239 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2881 454 SUPERFAMILY L domain-like 38 241 - -
Acco02g2881 454 Gene3D Phosphorylase Kinase; domain 1 208 306 - -
Acco02g2881 454 SUPERFAMILY Protein kinase-like (PK-like) 223 434 IPR011009 -
Acco02g2881 454 Pfam Leucine rich repeat 102 162 IPR001611 GO:0005515
Acco02g2881 454 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Acco02g2881 454 Gene3D Transferase(Phosphotransferase) domain 1 316 450 - -
Acco02g2881 454 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 441 - -
Acco02g2881 454 Gene3D Ribonuclease Inhibitor 35 200 IPR032675 -
Acco02g2881 454 FunFam Nuclear pore complex protein NUP107 35 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2881 Acco-ChrAcco02 33727215 33732815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2881 7 439 Receptor kinase-like Gene Family AT5G16000 51.646 6.94e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Acco02g2881 LRR_8 5e-07 CL0022