Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2838 ATGGCTGAAGAAGACTGGGATCTCTCCGCCGTGGTGCGAGGTTGCAGATCCTCCGCCACCGTTGCCGCTACCGGCACCAATACTCCACCACCACCATCTTCTTCTTCTTCTTCATCCAAGGACGTTCCTTTACCATTAATCAAACAAGAAAATGACGTCTTCTCTTTTCCCAGTTTGATTCAACCCACAACCAATGGGTTCCAAGAACTACACCAATTGCTCAGACCCTTTATCCCCACCACCACTACAGCCACCACCACAACCACCACTATCTCTACTAGTGGTTGTGGCATGTATCCCAATTCTTCTTTCACTGATTTTGCAGTTCCAGGGTCCAGTACTAATAATATTAATAATAACATAAATACTTCTCCATCTTCTTCTTACGCGTCCCATACAAGGCCTCATTTTGTGCCACAAGCCTCACCTTCCACTAGTTCTCCAGGATTTCAAAGATTCCATGAACAACATGTACAGCAACTCCAAAAACAAAAGCAAATTCAAGATCAACTACAACAGCTAGTTCATCAGAAACAGCAATTTCTAACACCGCCAGGTCAAATCAGCAGCGGCTGTAATAATAATTCGGGTATGACTTTACCAAATACGCAAGCTGCTCAAGCAACAACCAGATCGAGAAAAAGAAAGAGTCAACAGAGAAGAATGGTTTGCCATGTAACAGCGGAAAACCTCACCGCAGATTCTTGGGCCTGGAGAAAATACGGTCAAAAGCCCATTAAAGGCTCTCCATATCCCAGATGTAGCAGTTTAAAAGGTTGTGGAGCCCGTAAGCAAGTGGAGCGAAGCAATACTGAACCAGATATGTTCATCGTCACGTACACCGGAGAACATACGCATCCGCGACCTACCCATCGAAACTCGCTTGCCGGAAGTACTAGGAACAAACCGTCGTCGTTGACGACGACCCGTCAACCCACCTCTCATGAATCTGGATCACCAAGCACTAACTTGAACCGGGCATCGTCATCTTCACAGCTTTCTCCGACGACGCCGTTGACGGCGGTGGCGGCGAATGACGAGTGCACACATGAACCCATGTTAAGCAATGAAGCCACGAGCCCTTTCCCTGAAGACGATTTAGACTTGGCCTCTCACGAAGACATTCTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGTGCTGGTGAGCTTCACGGCGGAATTGGACTTAGTGGCGGTGGGGATGATAGCACAAGCAGCAATCCAGCGGATGGGTCGTATCCAAATACTGACCCGGGTTGA 1272 0.478 MAEEDWDLSAVVRGCRSSATVAATGTNTPPPPSSSSSSSKDVPLPLIKQENDVFSFPSLIQPTTNGFQELHQLLRPFIPTTTTATTTTTTISTSGCGMYPNSSFTDFAVPGSSTNNINNNINTSPSSSYASHTRPHFVPQASPSTSSPGFQRFHEQHVQQLQKQKQIQDQLQQLVHQKQQFLTPPGQISSGCNNNSGMTLPNTQAAQATTRSRKRKSQQRRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRCSSLKGCGARKQVERSNTEPDMFIVTYTGEHTHPRPTHRNSLAGSTRNKPSSLTTTRQPTSHESGSPSTNLNRASSSSQLSPTTPLTAVAANDECTHEPMLSNEATSPFPEDDLDLASHEDILIPNMAAMMDKFLLGAGELHGGIGLSGGGDDSTSSNPADGSYPNTDPG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2838 423 Pfam WRKY DNA -binding domain 234 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g2838 423 ProSiteProfiles WRKY domain profile. 227 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g2838 423 MobiDBLite consensus disorder prediction 20 43 - -
Acco02g2838 423 MobiDBLite consensus disorder prediction 185 221 - -
Acco02g2838 423 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 362 IPR044810 GO:0003700
Acco02g2838 423 MobiDBLite consensus disorder prediction 247 336 - -
Acco02g2838 423 MobiDBLite consensus disorder prediction 400 423 - -
Acco02g2838 423 MobiDBLite consensus disorder prediction 291 336 - -
Acco02g2838 423 MobiDBLite consensus disorder prediction 185 212 - -
Acco02g2838 423 MobiDBLite consensus disorder prediction 403 423 - -
Acco02g2838 423 SMART WRKY_cls 232 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g2838 423 MobiDBLite consensus disorder prediction 126 149 - -
Acco02g2838 423 SUPERFAMILY WRKY DNA-binding domain 226 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g2838 423 Gene3D WRKY domain 217 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2838 Acco-ChrAcco02 32497183 32498706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2838 211 339 WRKY Transcription Factor Family AT5G52830 66.165 2.71e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco02g2838 WRKY 1.3e-18 CL0274