Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2816 ATGGCAGATCAGCAGCCTCCTCCGCCGGCACCTAAAGGCTATAGATTAACAGCCTCTTCAATCTCCTACGCCAAAAGCACCGCCACAATTCCACCATTCTTACATCTTTTCAAATACTGTACCACCACAAGCCCTCCTCCTTATATCCTCAAGAACGTTTGCCTCACCGCCTACCCCTCCCAAATCCTCGCCATTGTCGGCCCCAGCGGCGCCGGCAAGTCCACGCTCCTCGACATCCTCGCCGCCCGCACTTCTGCCACCTCCGGTACCCTCCTCCTCAACTCCTCCCCCTTCAACCCTTCCTTCTTCCGCAAGCTTTCTTCTTACGTCCCACAAAACGACACCTGCCTCCCTCTCCTCACCGTCTCCGAGACCTTCGCCTTCGCTGCCCGCCTCCTCCAGCACAAGCCCTACAACACCGCCTCCCTCCTTGCCGAGCTCGGCCTCACTCACTTAGCTCACACGAGGCTTGCCGATGGGCTTTCCGGTGGTGAGCGAAGACGCGTCTCCATCGGCCTCAGCCTCCTCCATGACCCGGCCGTGTTGCTCCTCGACGAGCCTACCTCCGGCCTCGACAGCACCGGAGCTTTTAATGTCATGCAGATTCTAAAATCAATCTGCGTTTCGCGTCACCGAACCATTGTGCTATCTATTCACCAACCAAGCTTCAAGATTCTATCTGTCATTGACAGAATCTTATTTCTCTCCAAAGGATCAGTGGTTCATCATGGAACTCTTGCTTCGCTTCAGAGTTTTCTTCACTCTAGTGGCTTCTCTGTGCCTCCTCAGCTCAATGCATTGGAATACGCCATGGAAATATTAAACCAACTCGACCAGCTAGAACGCATGAACAACAACACTGCTCCAGATGAAGAATCTCGTACTAATTCTCCATCTAAAAACTTAGCCACCACCACTTCAAGAAAAATGATCCGATATAGAAGCTCCAGAATTCAAGAAATCTGTACTCTTTACGGCAGATTTTGGAAGATCATTTACAGAACAAAGCAGTTACTTTTAACCAACACATTAGAAGCACTTCTTGTTGGCATTGTTCTTGGAACTATTTACATCAACATTGGTTTTGACAAGGAAGGGATCGAGAAAAGGTTCGGCCTTTTCGCTTTCACTCTCACGTTCCTCCTTTCTTCCACCACTGAAACACTTCCGATCTTCATCGGAGAAAGACCGATCTTACTTAGAGAAACATCAAGTGGGGTTTATAGGTTATCCTCTTACATTGTCGCCAACACACTCGTTTTCTTACCATACTTACTGGTTATAGCTATTATCTACTCTATTCCAGTCTACTTCTTAGTGGGTTTGTGTGCTTCTTGGCTTTCTTTTGCTTACTTCGTTCTGGTCATTTGGCTCATAGTTCTAATGGCTAATTCATTTGTTCTTTTCTTGAGCTCTATTGCACCTAACTACATTGCTGGAACTTCACTTATGACAATGCTTCTCGCTGCTTTTTTTCTGTTTTCTGGGTATTTCATCTCCAAGGAAAGCTTACCCAAGTACTGGCTCTTCATGTACTTATTTTCTATGTACAAGTACGCTCTTGATGCTCTTCTCATAAACGAATACTCTTGTTTGGTCACGAGGTGTTTCATATGGTACGAGCAAAATGAAGGAGAGTGTATGGTTACTGGAGGAGATGTGATGAACAAGAAAGGACTTAGCGAGGCTCAGAGATGGACTAATGTGTATGCCATGCTTGGTTTCTTTGTGTTGTATCGTGTGCTTTGTTTGTTTGTGTTGATCAGAAGGGTTTCCAGAACAAAAAGTTAA 1791 0.4657 MADQQPPPPAPKGYRLTASSISYAKSTATIPPFLHLFKYCTTTSPPPYILKNVCLTAYPSQILAIVGPSGAGKSTLLDILAARTSATSGTLLLNSSPFNPSFFRKLSSYVPQNDTCLPLLTVSETFAFAARLLQHKPYNTASLLAELGLTHLAHTRLADGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTGAFNVMQILKSICVSRHRTIVLSIHQPSFKILSVIDRILFLSKGSVVHHGTLASLQSFLHSSGFSVPPQLNALEYAMEILNQLDQLERMNNNTAPDEESRTNSPSKNLATTTSRKMIRYRSSRIQEICTLYGRFWKIIYRTKQLLLTNTLEALLVGIVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFIGERPILLRETSSGVYRLSSYIVANTLVFLPYLLVIAIIYSIPVYFLVGLCASWLSFAYFVLVIWLIVLMANSFVLFLSSIAPNYIAGTSLMTMLLAAFFLFSGYFISKESLPKYWLFMYLFSMYKYALDALLINEYSCLVTRCFIWYEQNEGECMVTGGDVMNKKGLSEAQRWTNVYAMLGFFVLYRVLCLFVLIRRVSRTKS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2816 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 252 IPR027417 -
Acco02g2816 596 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Acco02g2816 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 262 IPR003439 GO:0005524
Acco02g2816 596 Pfam ABC-2 type transporter 320 529 IPR013525 GO:0016020|GO:0140359
Acco02g2816 596 Pfam ABC transporter 50 189 IPR003439 GO:0005524
Acco02g2816 596 Gene3D - 36 299 IPR027417 -
Acco02g2816 596 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 581 - -
Acco02g2816 596 SMART AAA_5 59 239 IPR003593 GO:0016887
Acco02g2816 596 FunFam ATP-binding cassette transporter 40 255 - -
Acco02g2816 596 Pfam ABC-2 type transporter 219 284 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2816 Acco-ChrAcco02 31617173 31618963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2816 43 255 Calmodulin-binding Proteins AT2G36910 27.273 1.73e-16 81.6