Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2807 ATGAAATTGAAAGGTTCAGAGAAAGAGTGGAGGAAAGGCCCTTGGACTCATGAAGAAGATAAGTTGCTGACTGAATATGTCAACTTTCATGGCGAGAGAAACTGGAGTTCTGTATCAAGATTTTCAGGGTTAAATAGGAGTGGAAAAAGCAGCAGGTTGCGATGGGTGAACTATTTGAAACCTGGACTCAAGAAAGGCCCACTTACACCCCAAGAACAAGGAATCATTATTGAACTTCATGCCTTACTGGGTAACAAGTGGTCTACAATAGCTAGATACTTGCCTGGTAGAACAGACAATGAGATCAAGAACTTTTGGAGAACTCACTTCAAGAAGAAGGACCACAAGTCATCTCACATTAAGAACCTTGAAAATCGAAGAGCAAAGATGCTAAGTTATAAACATCAAACAGTGAATGAGCAACGACCTCAAGAATATGATATGAAAAGCATGTCGTCTCATGGAGATACAAAAAATGAACCAAGCATTATGACCGAGACTACAGCAGAAAAAGAAGAGCATGCGGTCATTGATTTAATTCTTCATAACCAAACTTTGGAAGATCAGTGTTACATACCTTCGATGTACCAAGAGACGTACTTTCCATATGTTTGTCAAGAACCTGAAGGAGATGATAGCTTGTGGGTTAGTTTATGGGACCAGCTTGATGCATGA 675 0.3985 MKLKGSEKEWRKGPWTHEEDKLLTEYVNFHGERNWSSVSRFSGLNRSGKSSRLRWVNYLKPGLKKGPLTPQEQGIIIELHALLGNKWSTIARYLPGRTDNEIKNFWRTHFKKKDHKSSHIKNLENRRAKMLSYKHQTVNEQRPQEYDMKSMSSHGDTKNEPSIMTETTAEKEEHAVIDLILHNQTLEDQCYIPSMYQETYFPYVCQEPEGDDSLWVSLWDQLDA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2807 224 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 7 173 IPR044676 GO:0003700|GO:0006355|GO:0043565
Acco02g2807 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 59 IPR017930 -
Acco02g2807 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Acco02g2807 224 Gene3D - 67 141 - -
Acco02g2807 224 CDD SANT 69 110 IPR001005 -
Acco02g2807 224 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Acco02g2807 224 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Acco02g2807 224 FunFam Myb transcription factor 12 64 - -
Acco02g2807 224 CDD SANT 14 59 IPR001005 -
Acco02g2807 224 MobiDBLite consensus disorder prediction 140 161 - -
Acco02g2807 224 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Acco02g2807 224 SMART sant 64 112 IPR001005 -
Acco02g2807 224 SMART sant 11 61 IPR001005 -
Acco02g2807 224 Gene3D - 12 64 - -
Acco02g2807 224 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Acco02g2807 224 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2807 Acco-ChrAcco02 31252460 31254135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2807 11 220 MYB Transcription Factor Family AT3G30210 47.964 2.01e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g2807 Myb_DNA-binding 2.2e-13 CL0123