Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2762 ATGCTCAACCCACTTTTTTTTCCATCGCCCGGTTGTTCACCCCATTCCCTGACCGGCGGCTTCACTATAAAATTACAAAACGCAATGGCTCCAAAACAACCGAGTACGGGTTTATTCGTTGGATTGAACAAGGGTCACATTGTGACCAAGAAGGAATTGGCTCCACGCCCGTCAGATCGCAAAGGGAAAACCAGCAAGAGGGTGCACTTTGTAAGGAATATTATCCGTGAAGTTGCTGGCTTTGCTCCCTATGAGAAGAGGATTACTGAGCTTTTGAAGGTTGGCAAGGATAAGAGAGCATTGAAGGTTGCAAAGAGAAGGCTGGGTACCCACAAGAGAGCCAAGAAGAAGCGTGAAGAGATGTCTAACGTGCTCCGAAAGATGAGGGCTGGTGGAGCTGGTGACAAAAAGAAGTGA 417 0.4772 MLNPLFFPSPGCSPHSLTGGFTIKLQNAMAPKQPSTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2762 138 ProSitePatterns Ribosomal protein L36e signature. 83 93 IPR000509 GO:0003735|GO:0005840|GO:0006412
Acco02g2762 138 MobiDBLite consensus disorder prediction 107 138 - -
Acco02g2762 138 MobiDBLite consensus disorder prediction 115 138 - -
Acco02g2762 138 PANTHER 60S RIBOSOMAL PROTEIN L36 26 136 IPR000509 GO:0003735|GO:0005840|GO:0006412
Acco02g2762 138 Gene3D 60S ribosomal protein L36 27 135 IPR038097 -
Acco02g2762 138 Pfam Ribosomal protein L36e 36 129 IPR000509 GO:0003735|GO:0005840|GO:0006412
Acco02g2762 138 FunFam 60S ribosomal protein L36 29 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2762 Acco-ChrAcco02 29355696 29357180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2762 29 138 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 78.182 7.09e-57 171