Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2726 ATGATGATCAAGATAATCACTCTCTCACACATTCCCATCTTCTTCCTTCTAACGCCGGCCGTTGATTCCATGTTAGATCGTCAACGGCTAGATTTGCGATCTCCTCCTGAATTTTCACGAATCCTCAACTGGGACTCATCATACGCTCCCGTTTTGGCGGCCCTCATCTGTTCCTTCTCTTTCGTCATCTTCTTCTCCATCTACATCCGTTACTGTTCCGACTCCGACCAAATCGCCACCCGAGACCCGACCGGTACCTCAGCCGCCGCCGATTGTTCTTCCTCTAGTCGTCAAGGCATAGACCCTAAATTACTCGACACCTTCCCCATCCTTGCCTATTCCAGCATCAAACGCCTCAGGCTTGATGATAGTTCAGCGCTGGAATGTGCAGTGTGCTTGAGCGAGCTCGATCACCATGACTCGCTCCGATTGCTTCCGGTATGTAACCACGTGTTTCACCCTCAGTGCATAGATGCCTGGTTAGGCTCTCACGTGACTTGCCCTGTTTGTCGCTCGAGGCTGACGCCGGAGCACCACAACGGTGGTGATAATGACAACGGCCACGATGTTGTGATAGTAATTCCGGAGGAGGTAAATTCACAACATGAATTAGATGAAAGTTCTACGAGTAGTAGAAGAACAGAGTTTAATTCAGGAGAAAGAAGTTTGGGGAGGTCTCATTCTACGGGTCACTCTCTGAGTTTGGTTGAAACAGTAGGGAAGGACATGGAGAGGTATACTCTGAGGTTATCGGAGGATGTGAAGAAGTATATTCTGGCGAATCACGGAGGAATGCGGCGGTCGGCGAGCTACGATGTATTCGGGACAGGACGGCGGCCAGGTGAAGTTAAATTTCAAAAAAATTGA 867 0.4937 MMIKIITLSHIPIFFLLTPAVDSMLDRQRLDLRSPPEFSRILNWDSSYAPVLAALICSFSFVIFFSIYIRYCSDSDQIATRDPTGTSAAADCSSSSRQGIDPKLLDTFPILAYSSIKRLRLDDSSALECAVCLSELDHHDSLRLLPVCNHVFHPQCIDAWLGSHVTCPVCRSRLTPEHHNGGDNDNGHDVVIVIPEEVNSQHELDESSTSSRRTEFNSGERSLGRSHSTGHSLSLVETVGKDMERYTLRLSEDVKKYILANHGGMRRSASYDVFGTGRRPGEVKFQKN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2726 288 CDD RING-H2_EL5-like 128 171 - -
Acco02g2726 288 PANTHER RING FINGER DOMAIN-CONTAINING 51 178 - -
Acco02g2726 288 SUPERFAMILY RING/U-box 118 177 - -
Acco02g2726 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 177 IPR013083 -
Acco02g2726 288 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Acco02g2726 288 MobiDBLite consensus disorder prediction 201 231 - -
Acco02g2726 288 Pfam Ring finger domain 128 171 IPR001841 -
Acco02g2726 288 SMART ring_2 129 170 IPR001841 -
Acco02g2726 288 FunFam E3 ubiquitin-protein ligase ATL6 88 177 - -
Acco02g2726 288 MobiDBLite consensus disorder prediction 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2726 Acco-ChrAcco02 28091212 28092078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2726 11 261 Rapid Response to Elicitors AT3G05200 36.842 7.92e-44 152