Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2725 ATGATAATAATCACACCATTTCACATCCTTCTCTTGCTGCTACAGTCATGGGTCGCCGCCGCCGGTGACCGGTCAGCTTCTTCGCGGCGGGCAGCTCCTCCTCTCGCTCAACTCCACGACACGGATCCATCCTTCGTTCCCATAGCTGTGGCCTTCGGTTGCATCTTATTGTTTGTAGGCTTCTTTACCATCTACCTCTGGTATTGCGCCGACACGAGCTTTGCCGCCGCCGTCGGAGACGCAACCAGAGCCTTCACCACTTGCTGTTCTTGTGGTCCTCACGGTATCGACCGGAAAATACTAGACACTTTCCCCATCCTCACCTATTCCACGATCACACACCTTAAACCTCGGATTGTTCCATTAGAGTGTACTGTGTGCTTGAGCGAGTTCAATCACCATGACACTCTCCGATTGCTTCCCAAATGTAACCATGCCTTTCACCGTGACTGTATCGACAAATGGTTAGCCTCACATGTGACTTGTCCCGTTTGCCGCACGCGGCTGTCAAAGTCGTCCTTTCACCAGCACCACCGCCACCATCGTGGTGACAACGCGGCGGCGGTGATGATGATTCTGAATAATGAGGAAAATAATGCACACCGGGAGGTCGATGAAAGTTCCATAAGTAGAATGAATTATGTTCTTAGTTTTGGAGAGGCAAGTTTGAAGAGGTGTCATACAACGGGTCACTCTTTGGGTGTTGGATTGCCGCCGGACAATGTGAGTCAACAAATTCCGGCAAATTATGGCAGGTCGGCGAGCGACGGTGGTAGAGAGCGTTTGGGTCATTCATTGACACCTCCATCTGTTTCTCAGTCAAATGTGTTGCCTTCTTCTTCTTCCTCCTCACCTCAACATATTGCATTAAAGTTAGAAACTAAAGGAGAAGTATATGAGTTTGAAGACTAG 912 0.4956 MIIITPFHILLLLLQSWVAAAGDRSASSRRAAPPLAQLHDTDPSFVPIAVAFGCILLFVGFFTIYLWYCADTSFAAAVGDATRAFTTCCSCGPHGIDRKILDTFPILTYSTITHLKPRIVPLECTVCLSEFNHHDTLRLLPKCNHAFHRDCIDKWLASHVTCPVCRTRLSKSSFHQHHRHHRGDNAAAVMMILNNEENNAHREVDESSISRMNYVLSFGEASLKRCHTTGHSLGVGLPPDNVSQQIPANYGRSASDGGRERLGHSLTPPSVSQSNVLPSSSSSSPQHIALKLETKGEVYEFED 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2725 303 MobiDBLite consensus disorder prediction 266 287 - -
Acco02g2725 303 SMART ring_2 124 165 IPR001841 -
Acco02g2725 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 175 IPR013083 -
Acco02g2725 303 SUPERFAMILY RING/U-box 102 172 - -
Acco02g2725 303 CDD RING-H2_EL5-like 123 166 - -
Acco02g2725 303 FunFam E3 ubiquitin-protein ligase ATL6 84 172 - -
Acco02g2725 303 MobiDBLite consensus disorder prediction 232 287 - -
Acco02g2725 303 Pfam Ring finger domain 123 166 IPR001841 -
Acco02g2725 303 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 37 194 - -
Acco02g2725 303 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2725 Acco-ChrAcco02 28020226 28021137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2725 43 233 Rapid Response to Elicitors AT3G05200 34.804 3.58e-31 118