Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2722 ATGATATCCAGGTTCGTCGCCACCTTGCTCGTATTGACCATCGATGCTCAGCTAGTGGCTTCCCAACTAGAACCTTATCTTCGCTCACTTCACAACAATGACCCATCATTTACACCGGTGGTTGTAGCCCTCGGGCTCTCCTTCTTGTTCGTCATCTCCTTCGCCTTCTATCTCCGCCACTGCGCCGACTCCAATCTCATCACCATAGGCCCATCCGTAGCCTCCCCCGCCACCGTCGTCAATTACATTACTTCCCGCCGTGAACCTCAAGGCATCGACCCCAAATTTCTAGATACTTTTCCCACCCTCATGTATTCCAAACTCAAGAAAGACCTTATCAGGCTTGGTGGGAGTGTCCCGCTGGATTGTGTGGTGTGCTTGACGGAGTTCGAACACGATGAAATGCTCCGGTTGCTTCCGAAATGCAACCACGTGTTTCATCCTGATTGCATCAAGAAGTGGTTAGCTTCTAACGTGACTTGTCCTGTTTGTCGAGCGGTGTTGGAGCCGGAGGAGGAAATCGCGGTGGTGATTTGGAATGAGGCCAATGAACCGCGGGAGGAGGAGGAGGTTGGTGATAGATCAGCGAGATGGGTGGCGGCGACGAGGACGGCGGAGGTGAGTTCTGGAGAGAGAGGATTGAAGAGATGTCATTCAACGGGTCACTCTCTGGATTTGAGATCGATGAGGGATGACGTGTGGAAAGAGATTATGGGTTGGAGTACTCCGACGAACTACGATCTGTTTGGAGGACGTCAAGATGAAGGAAGCAGTCAAGGACGCTTGTTTCCGGTAATGTGTCTTCGTCTTCCTCATCCTCTCGTTCTCTTTACATTTCTACCCTTTCTATATACTACCTCGCTCACTTTTTTATAA 876 0.5057 MISRFVATLLVLTIDAQLVASQLEPYLRSLHNNDPSFTPVVVALGLSFLFVISFAFYLRHCADSNLITIGPSVASPATVVNYITSRREPQGIDPKFLDTFPTLMYSKLKKDLIRLGGSVPLDCVVCLTEFEHDEMLRLLPKCNHVFHPDCIKKWLASNVTCPVCRAVLEPEEEIAVVIWNEANEPREEEEVGDRSARWVAATRTAEVSSGERGLKRCHSTGHSLDLRSMRDDVWKEIMGWSTPTNYDLFGGRQDEGSSQGRLFPVMCLRLPHPLVLFTFLPFLYTTSLTFL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2722 291 CDD RING-H2_EL5-like 122 165 - -
Acco02g2722 291 PANTHER RING FINGER DOMAIN-CONTAINING 38 168 - -
Acco02g2722 291 SUPERFAMILY RING/U-box 122 170 - -
Acco02g2722 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 170 IPR013083 -
Acco02g2722 291 Pfam Ring finger domain 122 165 IPR001841 -
Acco02g2722 291 FunFam E3 ubiquitin-protein ligase ATL6 81 171 - -
Acco02g2722 291 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Acco02g2722 291 SMART ring_2 123 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2722 Acco-ChrAcco02 27975457 27976332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2722 9 224 Rapid Response to Elicitors AT3G05200 35.000 9.46e-32 120