Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2720 ATGATGCAGAGAACCAGAACCTCGCAGATCCTCGTCTTCTTCCTCCTATCATACGCCATCGATGCCCAGTCAAGTTCCCCGCCGGCGTCTTCTCCGAATGCTTCAATTAACACTTGGGATGTATCTTTCGCTCCCGTGATTGTGGCCATCGCTTGTGCCTTCTTCTTCATCGTCTGTTTCACCATATACCTCCACCACTGCTCCGACATGGAACTCCCCGCTGGAGACCCGACTGGCGTCACAGCCAGTTGTTCTTCAAGTGGTCCTCAAGGTATTGACCCAAAATTACTCGACTCCTTCCCCATCCTCGTTTATTCCGCGGCGAAAAACCTCAAATTTGGGAAATCCGCCGTGCTGGAATGTGCCGTGTGCTTGAGCGAGTTCGACCACCACGATACAGTCCGATTGCTTCCGAAATGTAACCACGTGTTTCACCCTCAGTGCATCGACGCCTGGTTTGCCTCCCACGAGACTTGCCCTGTTTGTCGTGCGCGGTTTAAACCGGCGGAGGAGGACCGGCAAGGTGAAATCGAAGTCGCGATAGTAATTCCTAACGAGGTAAGTTCAGTCACACCAGGTGTTCGATGA 588 0.5272 MMQRTRTSQILVFFLLSYAIDAQSSSPPASSPNASINTWDVSFAPVIVAIACAFFFIVCFTIYLHHCSDMELPAGDPTGVTASCSSSGPQGIDPKLLDSFPILVYSAAKNLKFGKSAVLECAVCLSEFDHHDTVRLLPKCNHVFHPQCIDAWFASHETCPVCRARFKPAEEDRQGEIEVAIVIPNEVSSVTPGVR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2720 195 CDD RING-H2_EL5-like 120 163 - -
Acco02g2720 195 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Acco02g2720 195 PANTHER RING FINGER DOMAIN-CONTAINING 25 166 - -
Acco02g2720 195 SMART ring_2 121 162 IPR001841 -
Acco02g2720 195 FunFam E3 ubiquitin-protein ligase ATL6 81 169 - -
Acco02g2720 195 Pfam Ring finger domain 120 163 IPR001841 -
Acco02g2720 195 SUPERFAMILY RING/U-box 120 170 - -
Acco02g2720 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 173 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2720 Acco-ChrAcco02 27935468 27936055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2720 10 176 Rapid Response to Elicitors AT3G05200 42.105 6.05e-37 130