Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2716 ATGATCAAAAGAATCACTCAGATTCTCGTCTTCTTAATTCTCTCGTCGGCCGTCGATGCCCAGTCAAGTTTGCCGCCACTGGTGGCGCCTTCTCCGAATGCTACACTCCCAAACCGGGTCCTGTATTTGGATCCCACGGTTGTGGTCCTCATTTGCGTCTTCTTTGTTGTAGGCTGCTTCTCCGTCTACATCCACCACTGGCCCAACGTCCTCCTCAGCCAGAGTGCAACCACCGCTAATTTTCACTCAACTCGACCTCAAGGTATTGATCCACAATTACTCAACACCTTCCCCATCCTCCCTTGCTCCGCGGTTAAGCAACTCAGATTCGGGAGTGCGGCAGCGCCGGAGTGTCCTGTTTGCTTGGCCGAGTACAACCACCACGATCAGCTCCGATTGCTACCGAAATGTCACCACGCGTTTCACTCTGAATGTATTGACGCCTGGTTGGCTTCCCACGTGACTTGCCCCGTGTGTCGCGCCAGGCTGAAGCCGGCGGAGGAGGAGCGCCACCACCGTGGTGGAAATGATGTCGTTATAAGAGTTCCGAATTAA 555 0.5405 MIKRITQILVFLILSSAVDAQSSLPPLVAPSPNATLPNRVLYLDPTVVVLICVFFVVGCFSVYIHHWPNVLLSQSATTANFHSTRPQGIDPQLLNTFPILPCSAVKQLRFGSAAAPECPVCLAEYNHHDQLRLLPKCHHAFHSECIDAWLASHVTCPVCRARLKPAEEERHHRGGNDVVIRVPN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2716 184 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Acco02g2716 184 PANTHER RING FINGER DOMAIN-CONTAINING 39 163 - -
Acco02g2716 184 Pfam Ring finger domain 117 160 IPR001841 -
Acco02g2716 184 SMART ring_2 118 159 IPR001841 -
Acco02g2716 184 CDD RING-H2_EL5-like 117 160 - -
Acco02g2716 184 SUPERFAMILY RING/U-box 117 166 - -
Acco02g2716 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 166 IPR013083 -
Acco02g2716 184 FunFam E3 ubiquitin-protein ligase ATL6 77 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2716 Acco-ChrAcco02 27872237 27872791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2716 8 177 Rapid Response to Elicitors AT3G05200 40.217 4.52e-28 106