Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2715 ATGAGCTGCTTCTTCATCTACTTCTACTACTGGTCTAACGTCCTCCTCTACCAGAGTGCCACAACCGCTAATTTTCACTCAACTCGATCTCAAGGTATCGACCCACAATTACTCAACACCTTCCCTATCCTCCCGTGCTCCGCAGTTAAGCAACTCAAATTCAGGAGTGCGGTGGTGCCGGAGTGTGCCGTATGCTTGGCCGAGTACAACCACCACGATCAGCTCCGATTGCTTCCAATATGTCACCACGCGTTTCACTCTGAATGTATTGATGCCTGGTTGGCCTCCCACGTGACTTGCCCTGTGTGTCGCGCCAGGATGAAGCTGGCAGAGGATGAGCGCCACCACCGCAGTGGAAACGATATCTTATAG 372 0.5215 MSCFFIYFYYWSNVLLYQSATTANFHSTRSQGIDPQLLNTFPILPCSAVKQLKFRSAVVPECAVCLAEYNHHDQLRLLPICHHAFHSECIDAWLASHVTCPVCRARMKLAEDERHHRSGNDIL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2715 123 FunFam E3 ubiquitin-protein ligase ATL6 21 110 - -
Acco02g2715 123 Pfam Ring finger domain 61 104 IPR001841 -
Acco02g2715 123 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 2 113 - -
Acco02g2715 123 SMART ring_2 62 103 IPR001841 -
Acco02g2715 123 SUPERFAMILY RING/U-box 61 110 - -
Acco02g2715 123 ProSiteProfiles Zinc finger RING-type profile. 62 104 IPR001841 -
Acco02g2715 123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2715 Acco-ChrAcco02 27851761 27852132 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2715 1 121 Rapid Response to Elicitors AT3G05200 41.406 1.75e-23 91.7