Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2713 ATGATTCAAACCATTCGATTCCATTTTAGCATACTCACATGGGTTCAACTGATTTCCCTGATATTCGTGCTAGGCGCGGCCGCGCAATCCGCCGTGCAGCCGGTGCCGACCTTCGCATCTCGGCAGCAGTGGGACCCTTCAATCGCTGCCATGGTGGGTGCCCTGTTCTGCGCCTTCCTATTCATGGGCTTCTTCTCTGTCTACCTTCGCCATTGCGCCGATGAGGAAGCTGCCGCCGGCCCGGCCGGAGACTGGTCGTGCTCGTGCTCAGAGGGCGTTGATCGGAAAGTCCTGGACACGTTCCCCATCCTCGTTTATTCTTCCATCAAGGACCTTAAAATGGGTAAAGGGGCGCTTGAATGTGCAGTGTGCTTGAACGAGTTCAAAGATAACGAAACTCTCCGATTACTTCCCAAATGCAACCATGTGTTCCATCCTTCTTGTATCGAAGCTTGGCTCTCTTCTCACGTGACTTGCCCTGTATGCCGGGAAAAGCTAACTCCAGATTACGATCAAGTGGCCATAACGGTTCCTCCACAATTGAACGTTATGGAGAGTAATGATAATAATCGCAGAGGTGAAAATGAGGAAGAAAGAAAGGATGAGAGTCCTGCAGAAAGGAGTGGTGAGAACGGCGGCGATGGTGGTGGTGAGGTTGAGGACGGTAAGGTGACCGTCGGAGGAGATCAGAGGTTGATCGTGTTGAGGAAGTCGAATTCGACAGGTCATTGTGAGGTGGAGAGGTATACGCTGACGTTGCCGGAGGATGTTCGGAATTATATTCTGGTGAACCATGACGGGTCGATGATGCGGCGGTCGGCGAGTTATAACGTGGGAATGTTCATGGGAGAGAGTCCGACGAAAGGGTTGTGTTGGAATGAGAAGGAGGTTATCGAGAAGGATAAGGAAGATCTTGTTCATACTCCATCATCATTGGTTAGTTGA 945 0.5111 MIQTIRFHFSILTWVQLISLIFVLGAAAQSAVQPVPTFASRQQWDPSIAAMVGALFCAFLFMGFFSVYLRHCADEEAAAGPAGDWSCSCSEGVDRKVLDTFPILVYSSIKDLKMGKGALECAVCLNEFKDNETLRLLPKCNHVFHPSCIEAWLSSHVTCPVCREKLTPDYDQVAITVPPQLNVMESNDNNRRGENEEERKDESPAERSGENGGDGGGEVEDGKVTVGGDQRLIVLRKSNSTGHCEVERYTLTLPEDVRNYILVNHDGSMMRRSASYNVGMFMGESPTKGLCWNEKEVIEKDKEDLVHTPSSLVS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2713 314 MobiDBLite consensus disorder prediction 189 217 - -
Acco02g2713 314 CDD RING-H2_EL5-like 120 163 - -
Acco02g2713 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 171 IPR013083 -
Acco02g2713 314 FunFam E3 ubiquitin-protein ligase ATL6 85 169 - -
Acco02g2713 314 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Acco02g2713 314 PANTHER RING FINGER DOMAIN-CONTAINING 37 166 - -
Acco02g2713 314 SMART ring_2 121 162 IPR001841 -
Acco02g2713 314 Pfam Ring finger domain 120 163 IPR001841 -
Acco02g2713 314 SUPERFAMILY RING/U-box 120 172 - -
Acco02g2713 314 MobiDBLite consensus disorder prediction 177 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2713 Acco-ChrAcco02 27837705 27838649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2713 18 262 Rapid Response to Elicitors AT3G05200 40.076 2.86e-51 172