Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2704 ATGGCTCCACCGCCGGTGGATAACAAAGGCGAGTCCTCGGGCGGTGAGTCTCAGAGATCTATTCCGACGCCTTTCTTAACGAAAACTTATCACCTTGTTGACGATCACACCATAGAAGATGTTATATCCTGGAACGAAGATGGATCCAGTTTCATCGTTTGGAATCCGATGGTTTTCGCCAGAGATTTGCTTCCTAAATATTTTAAGCACAACAATTTCTCTAGCTTCGTCCGCCAACTTAACACCTATGGGTTTAGAAAAGTAGTTCCCGATCGGTGGGAATTCACAAATGAGTGCTTTCGAAGAGGCAAAAAACAACTTCTGTGCGAAATTCAGCGTCGGAAAATCTCATCGCCTTCGGCAACATCACCTGGTGCAACTACGGTAGCGTCATTTCCGGCGACGCCGCCATTGACGGCAATACCTAGGGCGAAGCCTATCATATCGCCTACTATCTCAGGGGAAGAACAGGTCATTTCGTCGAATTCATCGCCGACCGGAGCTCCGGCTGAACTCTTGAACGAGAACGAGAGGCTGAGACAAGAAAACGTTCAGCTCAGCAAGCAATTAGCAGAGATGAGATCTCTTTGTAACAACATATTCAATCTAATGTCAAAATACGCAAACAACCAAAATATCAGTTTGCAATGCACGGCGAGTGACTTCACCGCCGTGAAACCGCTCGATTTGATGCCGGCCACGCAGAACTCCGGTCACTTGGACACGGTGGCGATGGTGGAAGATGAGAGGAATCCGAAGCTGTTCGGGGTGGCGATCGGTACGAAGCGATCACGGGAAGGAGGAGGATGTGGCGATCCGTTGCCAACCTTACACAGAGCGGGGCCTACAGAGATGAAATCAGAACCTTTGGGTTGCCAGAGGCGTCGAGATAATCAGGAAGCGCCGTGGCTGAATCAATGCCATAACGCAAATCAGAGAGTTTATAATTAA 951 0.4879 MAPPPVDNKGESSGGESQRSIPTPFLTKTYHLVDDHTIEDVISWNEDGSSFIVWNPMVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFTNECFRRGKKQLLCEIQRRKISSPSATSPGATTVASFPATPPLTAIPRAKPIISPTISGEEQVISSNSSPTGAPAELLNENERLRQENVQLSKQLAEMRSLCNNIFNLMSKYANNQNISLQCTASDFTAVKPLDLMPATQNSGHLDTVAMVEDERNPKLFGVAIGTKRSREGGGCGDPLPTLHRAGPTEMKSEPLGCQRRRDNQEAPWLNQCHNANQRVYN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2704 316 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco02g2704 316 Coils Coil 176 196 - -
Acco02g2704 316 Gene3D - 17 115 IPR036388 -
Acco02g2704 316 MobiDBLite consensus disorder prediction 1 22 - -
Acco02g2704 316 FunFam Heat stress transcription factor B-4 17 115 - -
Acco02g2704 316 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 263 IPR027725 -
Acco02g2704 316 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco02g2704 316 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco02g2704 316 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco02g2704 316 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Acco02g2704 316 MobiDBLite consensus disorder prediction 265 290 - -
Acco02g2704 316 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco02g2704 316 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2704 Acco-ChrAcco02 27670950 27671994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2704 1 316 HSF AT5G62020 45.946 5.95e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Acco02g2704 HSF_DNA-bind 1.1e-32 CL0123