Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2701 ATGAGGTTTGAGGGTTTAATTAGGAGCAATAGTAGAAACTACAGCTGTGGGAGTGCAAGAGTTGTGGCTGATATTTCTCCACACAATCTCTATATCCCCAGTGGTTCCATTGTTGAGCCACCTCTTCATTCTCCTCCTATTTCAACTCAACAGAAAATGGAGGGCCTTGGTGATATGGGCCTTATTGGGGAATTTGATCATAGTTTGATGGGTAGGATGAGGGATGATGAGTATGAGAGTCGGTCTGGGAGTGATAATTTTGAAGGAGTTTCCGGCGACGATCAGGATGCCGGCGGCGGTGATGATCAGTCTAAGAGAAGAAAGAAATATCACAGACACACGCCTCATCAAATTCAAGAGCTTGAAGCATTATTCAAGGAGTGTCCTCATCCTGATGAGAAGCAGAGGATGGAACTTAGTAAGAGGCTTGGCTTGGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTGGAACGCCATGAGAATATAATTCTGAGACAAGAGAATGAGAAACTCCGAGCTGAGAATAGTATGATCAAGGAAGCCATGGCCAACCCCATGTGTAACCAATGCGGTGGCCCGGCAATTCCTGGCCAAATTTCGTTTGAGGACCATCATCTCAGAATTGAAAATGCTCGGCTAAAGGATGAATTAAATCGAATATGTGTCTTGGCGAACAAGTTCCTGGGTAGGCCACTCTCATCCCTGGCCAGCCCCACGCCTGTTATGGGTTTGAATTCTGGCCTTGAACTCGCTATAGGAAGGAGTGAAATTGGTGGCTCAAGCACTTTAGGCTCTTCCTTGCCAATGGGGCTTGACTTAGGGGAAGGTATTTTGGGCACACCTTCGGCAATGCCCCGAATTAGATCGCCAATGATGGGAGGCGAAATTCACGTTGATAGGTCTATGCTCATTGATCTCGCGCTGTCTGCTATGGAGGAATTGATGAAGATGGTTCAGGCAGATAGCCCTCTCTGGATTAAGTGTTTGGGTGGTGAGAGAGAGATACTGGACCATGAGGAGTATGAAAGGATAATTTCTCTTTGTATTGGCCCGAAACCGGCTGGTTTTGTAACTGAAGCAACAAGAGAAACTGGGATAGTCATCATAAACAGTCTAGCCCTCATGGAGACATTTATGGATGCGAACCGGTGGGCGGAGATGTTTCCCTCGTTGATAGCTAGAGCTGCTACCGTTGATGTAATATCAAATGGTATGGGTGGAAGCAGAAATGGTGCTTTGCAAGTGATGCACGCTGAGGTTCAATTGCTTTCGCCGCTTGTACCCGTTCGTCAATTGAGATTTCTCCGGTTTTGCAAGCAGCATACGGAAGGTGTGTGGGCCTTAGTTGATGTTTCGGTTGAGATTGGCCATAGTTCAATCAACGGCCACCCGTACGTGAGCTGTAGGAGGCTTCCTTCAGGCTGTGTCGTGCAAGATATGCCCAACGGTTACTCCAAGGTTACATGGGTTGAACATACACAATACAATGAAAGCGTCGTTCACCAACTGTACCGGCCGTTGGTGAATTCCGGCTTCGGCTTTGGAGCTCACAGGTGGATTGCCACCCTTCAGAGGCAATGTGAATGCCTGTCAATCCTCATGTCCTCTTCTATACCCAGTGATGACCATACAGCATTAAGCCAAGCTGGTAGGAGAAGCTTGTTGAAGCTGGCGCAGCGCATGACCAATAACTTCTGTTGCGGGGTTTGTTTATCGTCGGCACGCAAGTGGGACGGCCTCCACATTGGCACTCTCGGTGATGATGTGAAGGTGATGACAAGGAAGAACGTGGATGACCCTGGGGAGCCTCCTGGGATCGTGCTGAGCGCGGCGACTTCTGTTTGGATCCCAGTGTCTCGAGAGAGCCTGTTCAATTTCCTGCGTGACGAACGGCTAAGGAGTGAGTGGGACATTTTGTCGAATGGGGGACCAATGCAGGAGATGGTCCATATTGCCAAAGGTCCAGGTTCTGGAAATTGTGTCTCTCTCCTTCGTGCCAGCGCTGTGAATCCCAACGAAAGCAATATGGTAATTCTACAAGAGACATGGACGGACCCGTCGTGCTCAGTGGTAGTGTATGCTCCGGTCGACGTTCAATCCTTGAATGTGGTAATGAGCGGTGGAGACTCCGCCTATGTCGCCCTCTTGCCCTCAGGGTTTGCCATCCTTCCCGACGGCCACCACACCAGCTTTGGTAGCGGTCTACTCAAAGGTGGCAACAGCCCCGACGGAGGTCACGGCAGTGACCGCCAGGGAAGCCTCCTCACCGTGGGGTTCCAGATTCTGGTAAACAGCCTGCCGACGGCAAAACTCACGGTGGAGTCGGTTGAGACGGTGAGTAACCTCATCGCCTGCACTATTCAGAAGATAAAAAACTCACTGCCAGTTGCATGA 2421 0.4928 MRFEGLIRSNSRNYSCGSARVVADISPHNLYIPSGSIVEPPLHSPPISTQQKMEGLGDMGLIGEFDHSLMGRMRDDEYESRSGSDNFEGVSGDDQDAGGGDDQSKRRKKYHRHTPHQIQELEALFKECPHPDEKQRMELSKRLGLENKQIKFWFQNRRTQMKTQLERHENIILRQENEKLRAENSMIKEAMANPMCNQCGGPAIPGQISFEDHHLRIENARLKDELNRICVLANKFLGRPLSSLASPTPVMGLNSGLELAIGRSEIGGSSTLGSSLPMGLDLGEGILGTPSAMPRIRSPMMGGEIHVDRSMLIDLALSAMEELMKMVQADSPLWIKCLGGEREILDHEEYERIISLCIGPKPAGFVTEATRETGIVIINSLALMETFMDANRWAEMFPSLIARAATVDVISNGMGGSRNGALQVMHAEVQLLSPLVPVRQLRFLRFCKQHTEGVWALVDVSVEIGHSSINGHPYVSCRRLPSGCVVQDMPNGYSKVTWVEHTQYNESVVHQLYRPLVNSGFGFGAHRWIATLQRQCECLSILMSSSIPSDDHTALSQAGRRSLLKLAQRMTNNFCCGVCLSSARKWDGLHIGTLGDDVKVMTRKNVDDPGEPPGIVLSAATSVWIPVSRESLFNFLRDERLRSEWDILSNGGPMQEMVHIAKGPGSGNCVSLLRASAVNPNESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHHTSFGSGLLKGGNSPDGGHGSDRQGSLLTVGFQILVNSLPTAKLTVESVETVSNLIACTIQKIKNSLPVA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2701 806 Coils Coil 158 193 - -
Acco02g2701 806 Gene3D - 316 536 IPR023393 -
Acco02g2701 806 Pfam START domain 315 538 IPR002913 GO:0008289
Acco02g2701 806 SMART START_1 314 538 IPR002913 GO:0008289
Acco02g2701 806 FunFam Homeobox-leucine zipper protein HDG1 91 180 - -
Acco02g2701 806 SUPERFAMILY Bet v1-like 308 538 - -
Acco02g2701 806 MobiDBLite consensus disorder prediction 76 114 - -
Acco02g2701 806 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 105 803 IPR042160 -
Acco02g2701 806 ProSitePatterns 'Homeobox' domain signature. 139 162 IPR017970 GO:0000981|GO:0006355
Acco02g2701 806 SUPERFAMILY Bet v1-like 585 801 - -
Acco02g2701 806 SMART HOX_1 106 168 IPR001356 GO:0003677
Acco02g2701 806 CDD START_ArGLABRA2_like 309 537 - -
Acco02g2701 806 ProSiteProfiles START domain profile. 305 541 IPR002913 GO:0008289
Acco02g2701 806 Pfam Homeodomain 107 162 IPR001356 GO:0003677
Acco02g2701 806 Gene3D - 96 180 - -
Acco02g2701 806 FunFam Homeobox-leucine zipper protein GLABRA 2 314 537 - -
Acco02g2701 806 CDD homeodomain 107 164 IPR001356 GO:0003677
Acco02g2701 806 ProSiteProfiles 'Homeobox' domain profile. 104 164 IPR001356 GO:0003677
Acco02g2701 806 SUPERFAMILY Homeodomain-like 94 164 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2701 Acco-ChrAcco02 27535029 27540747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2701 1 803 Homeobox Transcription Factor Family AT3G61150 56.899 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco02g2701 START 9.2e-49 CL0209