Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2689 ATGGGATTTCTCCGGCGACTCTTCGGTACCAAAAAATCGGATCATTCCTCCGGTGAGGACAAGAAGAAATGGTTCTTCGGCAAAACCAAGGACAAGTCTCACGGTTCTAAAACTAAAGGATCTGATCTCAACAACTTCGATTCCTCCGCAACATTCTCCGACTCTTTAGACGCCAATAAGCATGCCATTGCCGTAGCAGCGGCCACGGCCGCAGTGGCGGAGGCCGCACTAGCTGCTGCTCATGCGGCCGCTGAAGTAGTCCGACTAACCAGTGGCCCCTCCGTCACTCGACCGCCGAGTACGAGTTCGACACGGGCCAGCACTAGCCAACGCCGGGGGGTGGAGGAAGCGGCCGCCGTTAAAATACAGTCCGCTTTCCGGGCTTATATTTCAAGGAGAGCACTACGAGCGCTCAAAGCATTGGTGAGGCTGCAAGCACTGGTGAGAGGCCACATTGTAAGAAAGCAAACTACAGACATGCTCCGGCGCATGCAAACATTGGTCAGACTTCAGGCTCGGGCACGTGCGAACCGTGCGCACATGGCAGATCATCTTTATTCTAGCAAGTCTTCAATGTTTTTTCACCCTGTCCCTGAAGATCATGAGCGTCCACTTCGTGCCTATAGTACTAAATTTGATGGATCTTCCATCCTCAAGAGATGTAGCTCCAATGCAAATTTTAGGGAGATTAGCCCACAAGGAGCACAGTTTGGATCACATTTGTTGGATCGTTGGATGGAAGAAAGTGTTTGGAACCACCCAAGAGACGTTTCACTGAGAAATATGCGCGCCGATGATGAGAAGAGCGCCAAGATCCTTGAAGTGGACACATGGAAGCCACACTTCAGGTCTCACCGAAGCAGTAGCTCCTTCCACCATGCATCTCAATACTACTTAACCTCCGACTACGTCAACAGCGAGATGGCATATGACTCCCCACCCAAAAGCTCAGCGAAAGCTCTAAACCAAAGCCTCTCATCACTTAGCTCTTTGAAAATTCAGAAAGGAAAAGAAGCAGTAGTATCAGCTTCATCAAGAACAGCAGAGAATAGCCCACCAGCTCTTTCAGCTTCATCATCTAGACATGGAAGTGGAGGAGGTAGAAGAGGCCCTTTCACACCCACAAGGAGTGAGTGTTCTTGGGGTTTCTTTGGGTATCCCAATTACATGGCCAACACTGAATCATCAAGGGCTAAGGTTAGATCTCAGAGTGCTCCTAAGCAAAGGTTGGATTTTGATAGATATAGTTCAAGTGGGAGAAGTGTTCAGGGATTATGGGATTATTCAGATAGGGATGGAGATTTCAGAAACGGAGCCTATCCAGCTTCAACCCGCTTGAACTGA 1344 0.4933 MGFLRRLFGTKKSDHSSGEDKKKWFFGKTKDKSHGSKTKGSDLNNFDSSATFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGPSVTRPPSTSSTRASTSQRRGVEEAAAVKIQSAFRAYISRRALRALKALVRLQALVRGHIVRKQTTDMLRRMQTLVRLQARARANRAHMADHLYSSKSSMFFHPVPEDHERPLRAYSTKFDGSSILKRCSSNANFREISPQGAQFGSHLLDRWMEESVWNHPRDVSLRNMRADDEKSAKILEVDTWKPHFRSHRSSSSFHHASQYYLTSDYVNSEMAYDSPPKSSAKALNQSLSSLSSLKIQKGKEAVVSASSRTAENSPPALSASSSRHGSGGGRRGPFTPTRSECSWGFFGYPNYMANTESSRAKVRSQSAPKQRLDFDRYSSSGRSVQGLWDYSDRDGDFRNGAYPASTRLN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2689 447 MobiDBLite consensus disorder prediction 90 112 - -
Acco02g2689 447 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Acco02g2689 447 MobiDBLite consensus disorder prediction 8 38 - -
Acco02g2689 447 MobiDBLite consensus disorder prediction 93 111 - -
Acco02g2689 447 Gene3D - 114 166 - -
Acco02g2689 447 PANTHER IQ-DOMAIN 5-RELATED 23 418 - -
Acco02g2689 447 MobiDBLite consensus disorder prediction 1 44 - -
Acco02g2689 447 MobiDBLite consensus disorder prediction 397 424 - -
Acco02g2689 447 Pfam IQ calmodulin-binding motif 117 136 IPR000048 GO:0005515
Acco02g2689 447 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Acco02g2689 447 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Acco02g2689 447 SMART iq_5 114 136 IPR000048 GO:0005515
Acco02g2689 447 SMART iq_5 137 158 IPR000048 GO:0005515
Acco02g2689 447 Pfam Protein of unknown function (DUF4005) 349 410 IPR025064 -
Acco02g2689 447 MobiDBLite consensus disorder prediction 397 447 - -
Acco02g2689 447 MobiDBLite consensus disorder prediction 342 373 - -
Acco02g2689 447 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2689 Acco-ChrAcco02 27200164 27204349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2689 1 428 IQD Protein Family AT5G07240 42.539 5.32e-60 201