Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2688 ATGGCCGCCTCAACCGCTCCTTCCTCTTCCCTCTGCAATCGACTCCGCAGCCTCTACGTCACTCCTTCTTCCTTCTCAATTACCCTCAAATTCCCTTCCATGCCCATTTCTCATAAACCTCCCAATCTCAATCTCAAATCTCAAATCTCACTCTCTCACTCCATCTCCACTCTCACTCTACTATCTTCGTTTGCTTCTGCTGCTTTTGATGGATTCGAAGTCGCTCAAGACAGCACTGACGTTGAGCAAGTCCAAGAGCCAGAAGCCAAATTCTTCGAAAATTCAGAACAAGAGGAGGATGACCAGAAGGTATCTGACTCAAATGAAGCTGGGAGGATCTATGTGGGAAATTTTCCCTTCTCGATGACTTTTTCTCAGTTATCTGAGATTTTTCAAGATGCTGGCAATGTGGTGTCTGTAGAGATAGTATATGATCGCATCATGGATAGAAGCAGAGGATTTGTCTTTGTCACAATGGGAAGCGTTAATGATGCTAAAGAAGCCATTCGGATGTTTGATGGCTCTATAAGTTTCACACGCCCTTGCTCGTACCGAATTTAA 561 0.4456 MAASTAPSSSLCNRLRSLYVTPSSFSITLKFPSMPISHKPPNLNLKSQISLSHSISTLTLLSSFASAAFDGFEVAQDSTDVEQVQEPEAKFFENSEQEEDDQKVSDSNEAGRIYVGNFPFSMTFSQLSEIFQDAGNVVSVEIVYDRIMDRSRGFVFVTMGSVNDAKEAIRMFDGSISFTRPCSYRI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2688 186 PANTHER OS02G0815200 PROTEIN 42 175 - -
Acco02g2688 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 113 177 IPR000504 GO:0003723
Acco02g2688 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 111 186 IPR000504 GO:0003723
Acco02g2688 186 SUPERFAMILY RNA-binding domain, RBD 108 181 IPR035979 GO:0003676
Acco02g2688 186 Gene3D - 68 185 IPR012677 -
Acco02g2688 186 SMART rrm1_1 112 185 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2688 Acco-ChrAcco02 27162580 27163247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2688 113 169 Eukaryotic Initiation Factors Gene Family AT1G49760 40.351 3.84e-06 44.7