Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2670 ATGGCACGCAATCCGAACATATTTATATGCCGCGGATATTTTTATTTACTATTTATGTTTCCTTTTCGTAAGTTCAATCTATACGTCTTGCGTTTACTGCTACAACAAGAACAGAGAATTGCAGAGAGCAAAAGGGTAAAAGGTGCGATGTCACGGGAGGCTCATGAGGAAGAAGAGAACATGGCTGCTTGGCTTGTTGGTATAAATACCCTAAAGATTCAACCTTTCAAGCTGCCACCTCTGGGTCCCCATGATGCCAGAATTCGAATCAAAGCTGTTGGTATATGTGGCAGTGATGTTCACTACTTCAAGAAAATGAGAAATGCACATTATATAATGAAAGAACCCATGGTAATGGGCCATGAGTGTGCAGGGATCATAGAAGAAGTTGGCAGTGAAGTAAAGAATGTGGTACCTGGTGACCGTGTGGCAATTGAACCTGGCATTAGTTGCTCTCATTGTGACCTCTGCAAGCTAGGTCGTTATAACTTATGCCCTAATATGAAGTTCTTTGCTAGCCCACCTGTTCATGGTTCTCTTGCTAATCAGATAGTGCATCCTGCAAAGCTATGTTTCAAATTGCCAGACAACGTGAGCTTGGAGGAGGGGGCAATGTGTGAACCATTGAGTGTCGGTGTTCATGCGTGTTGCCGGGCTAATATTGGAGCAGAAACAAATGTGTTGATCATGGGAGCAGGGCCAATTGGACTTGTCACAATGCTCTCAGCTCATGCTTTTGGGGCTCCCAGAGTCATCATTGTGGATGTGGATGAGCATCGTTTATCTTTTGCAAAATCTCTTGGTGCAGATGAAACCATTAAAGTTTCAGTAAAAATTGAGGATGTGAGAGGAGAAGTTGTACAGATTCAAAAGGCTATGGGAGGTAGGGTGGATGTTTGCTTTGATTGTGCAGGTTTCAACAAAACTATGACCACTGCATTGAGTGCCACTCATGCGGGAGGCAAAGTGTGCCTTGTGGGAATGGCACAGACTCAAATGACTGTTCCCCTCACGCCCTCTGCTGCAAGGGAAGTTGATGTGATTGGGATATTCCGTTACAAGAACACATGGCCCCCGTGTCTGGAGTTTCTGAGGAGTGGGAAGATAGATGTGAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAGAAGGAGGTTGAAGAAGCCTTTGAAACCAGTGCTCGTGGTGGCAATGCTATAAAGGTCATGTTCAATCTGTAG 1221 0.4464 MARNPNIFICRGYFYLLFMFPFRKFNLYVLRLLLQQEQRIAESKRVKGAMSREAHEEEENMAAWLVGINTLKIQPFKLPPLGPHDARIRIKAVGICGSDVHYFKKMRNAHYIMKEPMVMGHECAGIIEEVGSEVKNVVPGDRVAIEPGISCSHCDLCKLGRYNLCPNMKFFASPPVHGSLANQIVHPAKLCFKLPDNVSLEEGAMCEPLSVGVHACCRANIGAETNVLIMGAGPIGLVTMLSAHAFGAPRVIIVDVDEHRLSFAKSLGADETIKVSVKIEDVRGEVVQIQKAMGGRVDVCFDCAGFNKTMTTALSATHAGGKVCLVGMAQTQMTVPLTPSAAREVDVIGIFRYKNTWPPCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2670 406 FunFam Sorbitol dehydrogenase 211 351 - -
Acco02g2670 406 SMART PKS_ER_names_mod 67 404 IPR020843 GO:0016491
Acco02g2670 406 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 197 370 IPR036291 -
Acco02g2670 406 SUPERFAMILY GroES-like 60 232 IPR011032 -
Acco02g2670 406 Gene3D - 70 393 - -
Acco02g2670 406 Pfam Zinc-binding dehydrogenase 234 364 IPR013149 -
Acco02g2670 406 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 120 134 IPR002328 GO:0008270|GO:0016491
Acco02g2670 406 PANTHER SORBITOL DEHYDROGENASE 58 406 - -
Acco02g2670 406 CDD sorbitol_DH 62 405 IPR045306 GO:0016616
Acco02g2670 406 Gene3D - 211 351 - -
Acco02g2670 406 Pfam Alcohol dehydrogenase GroES-like domain 83 194 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2670 Acco-ChrAcco02 26653902 26662433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2670 73 339 Monolignol Biosynthesis Gene Families AT4G37980 26.619 1.00e-15 75.5