Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2669 ATGTCACGTGAAGGTCATGGAGAAGAAGAGAATATGGCTGCTTGGCTTCTTGGTATAGATACCCTCAAGATTCAACCTTTCAAGCTTCCTACTCTGGGACCCCATGATGTCAGAATTAGGATGAAAGCTGTTGGTATCTGTGGCAGTGATGTTCACTACCTCAAGACTCTGAGATGTGCAGATTTTATAGTGAAAGAACCAATGGTAATTGGCCATGAGAGTGCAGGGATCATAGAGGAGATTGGTAGTGAGGTAAAGCATTTGGTACCTGGAGATCGTGTGGCAATTGAACCTGGGATTAGTTGTTGGCGTTGTGATCTCTGTAAAGACGGTCAATACAATTTATGCCCTGATATGAAGTTCTTTGCAACTCCACCAGTTCATGGTTCCCTTGCTAATGAGATAGTCCATCCTGCGGACCTATGTTTCAAATTACCAGACAATGTGAGCTTGGAGGAGGGGGCAATGTGCGAACCCCTGAGTGTTGGCGTTCATGCTTGTCGCCGAGCTAGTGTTGGACCAGAGACAAATGTGATGATCATGGGAGCAGGTCCCATTGGACTTGTCACAATGCTTTCAGCTCGAGCTTTTGGGGCACCCAGGATCATCATTGTGGAAGTGGATGAGCATCGTTTGTCTGTTGCAAAAAATCTTGGGGCAGATGAGACCATTAAGGTTTCAACAAAGATTGAGGATGTGAGTGACGAAGTTGTTCAGATGCATAAAGCTATGGGAGGTAGGGTGGATATTACCTTTGATTGCGCGGGTTTCAACAAAACTATGACATCTGCATTAAGTGCTACTCGAGCGGGCGGCAAAGTGTGCCTTGTGGGGATGGGTCATAGTGAAATGACTGTTCCACTCACGCCTGCTGCTGCAAGGGAAGTTGATGTGATAGGGATATTCCGTTACAAGAACACATGGCCTCTGTGTTTGGAGTTTCTGAGGAGTGGCAAGATAGATGTGAAACCTCTTATCACTCACAGGTTTGGATTCTCTCAGGAGGAGGTTGAAGAAGCCTTTGAAACCAGTGCTCGTGGTGGCAATGCTATTAAGGTCATGTTTAATCTGTAA 1074 0.459 MSREGHGEEENMAAWLLGIDTLKIQPFKLPTLGPHDVRIRMKAVGICGSDVHYLKTLRCADFIVKEPMVIGHESAGIIEEIGSEVKHLVPGDRVAIEPGISCWRCDLCKDGQYNLCPDMKFFATPPVHGSLANEIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRASVGPETNVMIMGAGPIGLVTMLSARAFGAPRIIIVEVDEHRLSVAKNLGADETIKVSTKIEDVSDEVVQMHKAMGGRVDITFDCAGFNKTMTSALSATRAGGKVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSARGGNAIKVMFNL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2669 357 Pfam Zinc-binding dehydrogenase 185 315 IPR013149 -
Acco02g2669 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 321 IPR036291 -
Acco02g2669 357 SMART PKS_ER_names_mod 18 355 IPR020843 GO:0016491
Acco02g2669 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Acco02g2669 357 PANTHER SORBITOL DEHYDROGENASE 10 357 - -
Acco02g2669 357 Gene3D - 21 344 - -
Acco02g2669 357 CDD sorbitol_DH 13 356 IPR045306 GO:0016616
Acco02g2669 357 Pfam Alcohol dehydrogenase GroES-like domain 34 145 IPR013154 -
Acco02g2669 357 Gene3D - 162 302 - -
Acco02g2669 357 SUPERFAMILY GroES-like 11 183 IPR011032 -
Acco02g2669 357 FunFam Sorbitol dehydrogenase 162 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2669 Acco-ChrAcco02 26650507 26653807 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2669 24 290 Monolignol Biosynthesis Gene Families AT4G37980 28.058 2.19e-20 88.6