Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2623 ATGCCCTCGAATTTTTTCTGTTGTTTCTGTGGTTTCCTCCCAAAAGATGAACACCAGCAAGCCAAAACAGGTGATGGCAAAAATAGGGACTATTCATGGGAAATGTACACGCTGAAGGAGTTGCTTCGTGCAACAAACAATTTCCATCAAGATAACAAGATAGGAGAGGGTGGTTTTGGAAGTGTTTATTGGGGTCGAACGACCAAAGGCATCGAGATTGCAGTGAAGAGACTGAAGACGATGACGGCGAAATCAGAGATGGAATTTGCAGTTGAAGTAGAAGTACTTGGAAGGGTGAGGCATAACAACTTGTTAGGTCTAAGAGGATTCTACGCTGGAGGAGAAGAAAGACTTATTGTTTACGACTTCATGCCCAATCATAGCTTGCTCACTCATCTTCATGGCCAGCTCTCTTCTAGCTGTCAGCTAGATTGGCCTAAAAGAATGAGCATCGCCATCGGAGCAGCCGAAGGCTTAGCGTATCTGCACCATGAGGCGAATCCTCACATTATACATAGAGACATAAAGGCAAGCAATGTTCTTTTGGACACTGAGTTTCAAGCCAAAGTGGCTGATTTTGGGTTTGCAAAGCTAATACCAGAAGGTGTGAGCCATCTGACCACAAGAGTCAAAGGAACTTTGGGATATTTGGCGCCAGAATACGCCATGTGGGGTAAGGTTTCAGAGAGCTGTGATGTGTATAGCTTTGGGATTTTGCTTTTGGAGATCATAAGCGCGAAGAAGCCGATAGAAAAGCTTCCGGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACACCTTATGTTCAAAAGGGTATATTCACTCATATTGCAGATCCAAAGTTGAAGGCTAAGTTTGACATGGAGCAGTTGAAATCTGTGGTGATACTGGCTACGAAGTGCACAGATAGTAGCCCGGAGAAGCGGCCGAGTATGGCAGAGGTGGTGGCGTGGCTCAAGGGCAGTGGGGGCGGTGGCGTTGGGAGGAGGAAGGAAATTCCGGCAGCTCTAAGGGACAAGCATGGTGATGAAGAAAACGACAAGAATGATAAGGACTATGAAGACTTGGGAAAGAGGCAATCCATGTTGAGGATACCAAGTGATAGATATAAAATAAGATGA 1122 0.4563 MPSNFFCCFCGFLPKDEHQQAKTGDGKNRDYSWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTTKGIEIAVKRLKTMTAKSEMEFAVEVEVLGRVRHNNLLGLRGFYAGGEERLIVYDFMPNHSLLTHLHGQLSSSCQLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGVKRDIVQWVTPYVQKGIFTHIADPKLKAKFDMEQLKSVVILATKCTDSSPEKRPSMAEVVAWLKGSGGGGVGRRKEIPAALRDKHGDEENDKNDKDYEDLGKRQSMLRIPSDRYKIR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2623 373 Gene3D Phosphorylase Kinase; domain 1 14 123 - -
Acco02g2623 373 MobiDBLite consensus disorder prediction 332 373 - -
Acco02g2623 373 ProSiteProfiles Protein kinase domain profile. 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2623 373 FunFam PTI1-like tyrosine-protein kinase At3g15890 19 123 - -
Acco02g2623 373 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2623 373 SUPERFAMILY Protein kinase-like (PK-like) 30 321 IPR011009 -
Acco02g2623 373 FunFam PTI1-like tyrosine-protein kinase At3g15890 124 332 - -
Acco02g2623 373 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Acco02g2623 373 Pfam Protein kinase domain 48 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2623 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Acco02g2623 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 322 - -
Acco02g2623 373 Gene3D Transferase(Phosphotransferase) domain 1 124 323 - -
Acco02g2623 373 MobiDBLite consensus disorder prediction 323 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2623 Acco-ChrAcco02 25114641 25116406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2623 14 322 Receptor kinase-like Gene Family AT2G48010 43.218 3.09e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Acco02g2623 Pkinase 2.6e-45 CL0016