Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2620 ATGTTTCCTTTACAACGAGGCAATGAGCTGGTCATCCAATTTTCCAGGAGTCCCAATACTCAGAACCAAGAAAGCAAGATCTCATCCGAAGATCCGATTCTGAAGGATGATTATGATTCTCCTCGAGTCAGCAATTCTGATAATAAAGGAATAATTGGCAACAACTCAACAGGGAACAACATACTCCCTCGAGCTGCTAGAAGTAGTAATATGAATAATCCAAACGAAAACAAGAAGAAGAAGACGATTCACAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGACTTCCCTTTATGCTTCCCTCAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAGAGATCGATATCGGATCATATGAATGAGGCAGTGACTTATATAAAGCATTTACAGAAGAATATCAGAGAACTTGGTGCTAAAAGAGATTTACTGAAGAAGCACTCAGATAATTATTCTAACTTGGAAACCCCTGATGATGATGAGAGCAAACAGAAATCGATAAACTTTACTGTCCATGAGAATAATGGTGTTGTGGGAATTGAAATTATCAGTAACTTCAAAGATGAAAGGTTCTTACTGTCAAAGTTTATGGAATTGCTGCTTGAAGAAGGACTTGAAGTTGTTACTTGTCTCTCTACCCAAGTCAATGGTAGAATACTTCATAGTATCAACTGTCAGGTTAACAGTTCCAGTAGTGTAGATCTAACTGAGCTGAGAAGGAAAATTGCAAGTTTCAATTCTTAG 747 0.3829 MFPLQRGNELVIQFSRSPNTQNQESKISSEDPILKDDYDSPRVSNSDNKGIIGNNSTGNNILPRAARSSNMNNPNENKKKKTIHREIERQRRQEMTSLYASLRSLLPLEYIKGKRSISDHMNEAVTYIKHLQKNIRELGAKRDLLKKHSDNYSNLETPDDDESKQKSINFTVHENNGVVGIEIISNFKDERFLLSKFMELLLEEGLEVVTCLSTQVNGRILHSINCQVNSSSSVDLTELRRKIASFNS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2620 248 CDD bHLH_AtORG2_like 84 147 - -
Acco02g2620 248 MobiDBLite consensus disorder prediction 29 43 - -
Acco02g2620 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 148 IPR036638 GO:0046983
Acco02g2620 248 FunFam Transcription factor bHLH126 71 159 - -
Acco02g2620 248 Coils Coil 128 148 - -
Acco02g2620 248 MobiDBLite consensus disorder prediction 44 76 - -
Acco02g2620 248 MobiDBLite consensus disorder prediction 13 85 - -
Acco02g2620 248 Pfam Helix-loop-helix DNA-binding domain 80 132 IPR011598 GO:0046983
Acco02g2620 248 Gene3D - 70 157 IPR036638 GO:0046983
Acco02g2620 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 131 IPR011598 GO:0046983
Acco02g2620 248 MobiDBLite consensus disorder prediction 13 28 - -
Acco02g2620 248 SMART finulus 85 137 IPR011598 GO:0046983
Acco02g2620 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2620 Acco-ChrAcco02 25056336 25057664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2620 84 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 43.373 1.51e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco02g2620 HLH 2.4e-11 No_clan