Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2618 ATGATCTCCCGGAAATTCTCCTTCTCGCCATCGTCCCCAGTTGTTTCTGATCCATACCCACCTGCTATTTCTCCGAGTCAGCTACATCCCTCTTACAAGTACCACAAAAGCCACCATCTTTTGCCTCCGTTGGTTGCTTCTGCCGCCTCTGTATGTTCCTTCTTTCTTCTCTTTTTCCTCTGTTTTCGCCGACTCACTCGAAAACGCACAACCCCGTCTTCTGATTCTGAGTCTAAACCTCCTTATTGTTTCTCGTACTCCGTACTCCGCCGTGCTACGTCATCCTTCTCCAACCGCCTCGGCCAAGGTGGCTTCGGTCCTGTGTACTCCGGCACTCTGCCGCCGACCCGACAACCTGTCGCCGTCAAGCTCATGGACTCTGCCTCTCTCCAGGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCGTCCAGGCTCCACTCTCAGCACGTGGTCTCCGCCATCGGCTTTTCCTCCGACAAAAATCGCCGGAAGTTCTTGCTTGTCTACGAGTTGATGCATAATGGGAATCTCCAAGACGCGCTCTTGCACCGCAAGTGCCCTGAGTTGTTGGATTGGAAGAAGCGGTTTTCCGTCATCGTCGACATAGTCAAAGGGATTCAGTATCTTCATTCTTGCGATCCACCCGTGATTCACGGCGATATCAAGCCCAGTAATATTCTATTAGACAGTTCTATGTCGGCGAAAATTGGGGATTTTGGTCTTGCAAGGCTGAAATCGGAACCCCAGATTGAAATTGAGATTTTGAAGTCAGACGGTAATGAAATGAAGAATGATGGATTGGAACTAGAAGAGGAAAAGAAGGGAAAGGAAGAAGAACTAGAGAGTAATGGTGGGTCAATGCTTGAGGAAACACAGAGCGTGAATACCGTTGATGAAGGTAGCTTAGCTGCAGAGCAATCTCCCGAGGTTTTTGTCAGGATACCCACATCGGAGCCGTCCCCGGAGCCGGTGGAGGAGGCAGCTGCTGCACCGTCCCCTTCAGAGGCGAATTTCGACAAAATTAGCGTTCAGAGTGAATTAAACATTTCCTTGAGTTGTAAGAAAAACGGGAAAGTCTTAAAGAGCAATTCCATGAAGGATTGGTGGTGGAAGCAAGACATCGAAGGAGCAGCAACATCATCTCCCATGGGGGAGAATAAGAAAGTGAAGGATTATGTAATGGAATGGCTTGGAAAAGAAATAAGTAAAGAGAGACCCAAGAGCGAATGGGTTGCATCAGAAGCAGTAGCTACCTCTAGTAGTGTCACAACAATGGAAAAAACAGAGAAAAAGAAGAGCAAGAGGCACTTGGAATGGTGGAGATCAATGGATGAGGAAGCCATTAAACCTAAAACTTTAAAGAAGGAGAAGAAAAGGCCAGCGAGAGAATGGTGGAAAGAGGAATACTGTGAAGAGCTTGCAAAGAAGAAGAAGAAAAAGAAGAAGCAGCAACAAAAGAGAAATGGAATAAACAATGATGATGACTGGTGGGTAAGAGAAGCAGAAGACTTGTATGGAGAAAGAAAAAAGCCCAAAACTCGAAAAAACAGCCGCAGTAATATAGATTCTTGGTTAGATGGATTCAGTAGCGAGTTATTCAGAGCTAGAAGGAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAGTGGTGGTGTTAGTAGTACACCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAGTATGGTTTTGGTGAAGATTTATCAGAGAAGTGCGATGTATATAGTTTTGGGGTATTATTACTGGTTATAGTTTCTGGGCGACGGCCACTTCAAGTGACTGGTTCGCCATTATCAGAGTTTCATAAAGCAAATTTGCTGTCATGGGCACGCCATTGTGCACGCAATGGGAAGCTGCTTGATCTGGTTGATCAGTCTATTAAGTCATTAGATAAAGATCAAGCTGTTCTATGCATCACAATTGCTCTTCTTTGTTTGCTCAAGAATCCGTCTCGTCGTCCTTCAATGAAAGAGATTGTGAAAATGCTTAGTGGTGAACTTGAGCCACCACAATTGCCAGTTGAGTATTCACCATCAACCCCTTCTCGTTTTCGAGCCAAGGCTCGCAAAAAGGGTCTGTGA 2112 0.4612 MISRKFSFSPSSPVVSDPYPPAISPSQLHPSYKYHKSHHLLPPLVASAASVCSFFLLFFLCFRRLTRKRTTPSSDSESKPPYCFSYSVLRRATSSFSNRLGQGGFGPVYSGTLPPTRQPVAVKLMDSASLQGEREFHNELFFASRLHSQHVVSAIGFSSDKNRRKFLLVYELMHNGNLQDALLHRKCPELLDWKKRFSVIVDIVKGIQYLHSCDPPVIHGDIKPSNILLDSSMSAKIGDFGLARLKSEPQIEIEILKSDGNEMKNDGLELEEEKKGKEEELESNGGSMLEETQSVNTVDEGSLAAEQSPEVFVRIPTSEPSPEPVEEAAAAPSPSEANFDKISVQSELNISLSCKKNGKVLKSNSMKDWWWKQDIEGAATSSPMGENKKVKDYVMEWLGKEISKERPKSEWVASEAVATSSSVTTMEKTEKKKSKRHLEWWRSMDEEAIKPKTLKKEKKRPAREWWKEEYCEELAKKKKKKKKQQQKRNGINNDDDWWVREAEDLYGERKKPKTRKNSRSNIDSWLDGFSSELFRARRNSHDSAASWEIPKSGGVSSTPSMRGTVCYVAPEYGFGEDLSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHKANLLSWARHCARNGKLLDLVDQSIKSLDKDQAVLCITIALLCLLKNPSRRPSMKEIVKMLSGELEPPQLPVEYSPSTPSRFRAKARKKGL 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2618 703 FunFam Os07g0541700 protein 173 258 - -
Acco02g2618 703 SUPERFAMILY Protein kinase-like (PK-like) 71 690 IPR011009 -
Acco02g2618 703 SMART serkin_6 94 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2618 703 MobiDBLite consensus disorder prediction 262 288 - -
Acco02g2618 703 Pfam Protein kinase domain 558 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2618 703 Coils Coil 467 494 - -
Acco02g2618 703 Pfam Protein tyrosine and serine/threonine kinase 96 246 IPR001245 GO:0004672|GO:0006468
Acco02g2618 703 Gene3D Transferase(Phosphotransferase) domain 1 534 680 - -
Acco02g2618 703 Gene3D Transferase(Phosphotransferase) domain 1 173 268 - -
Acco02g2618 703 MobiDBLite consensus disorder prediction 679 703 - -
Acco02g2618 703 PANTHER OS07G0586332 PROTEIN 24 701 IPR044576 -
Acco02g2618 703 Gene3D Phosphorylase Kinase; domain 1 82 172 - -
Acco02g2618 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Acco02g2618 703 MobiDBLite consensus disorder prediction 262 284 - -
Acco02g2618 703 ProSiteProfiles Protein kinase domain profile. 94 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2618 703 MobiDBLite consensus disorder prediction 316 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2618 Acco-ChrAcco02 24992759 24994870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2618 551 673 Receptor kinase-like Gene Family AT3G58690 35.156 6.35e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Acco02g2618 PK_Tyr_Ser-Thr 1.7e-27 CL0016