Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2607 ATGGAGGATCCTACGCCGGTGTTGTTTCGTACCGGCAAGCAGGGGATGCAGGTTAAGCTGTTTTTAGCTATGGCGCTGTTTTTATTTCTCTGTTCGTTTGCTTCATCTCTCGACGACGAAGGACAAACTTTAATGGCTATCAGGGCTTCTTTCAGCAATGCAGCGAATGAGTTGCTTGATTGGGATGGTGTACCAAACGACGACTTTTGTTCTTGGAGCGGAGTATACTGTGATCAGACCGGCGATACTGTGCTTACTCTGAATCTGTCAAGTTTAAACTTGGGTGGTGAAATATCACCAGCCATCGGCGAATTAAGAAGCTTGCAATCCATAGATTTGTCTGATAACCAGTTATACGGGGACGTGCCTTTCTCCCTATCCAAGCTAAAGCAGCTAGAGTTTCTGAATTTGAAGAATAATCAGTTGACTGGTCCTATTCCATCTACATTATCCCAAATTCCTAACCTGAAAACGCTTGATCTTGCTCGAAACCAGCTCTCTGGTGAGATACCAAGATTGCTCTACTGGAATGAGGTCTTACAGTATCTAGGTTTGCGAGGGAACAATCTGACTGGTACTCTGTACCCTGACATTTGTCAATTAACTGGTTTGTGTGATGTGAGAGGCAATAATTTAATGGGCACAATACCTGAGAGTATTGGTAACTGTACAAGTTTTGAGATTTTGGATTTATCATACAATCAACTCAGTGGGGAAATCCCTTACAACATTGGATTTCTCCAAGTTGCAACTTTGTCTCTTCAAGGTAACAGGCTGACTGGGAAGATTCCAGAGGTGATTGGTCTGATGCAAGCTCTTGCTATTCTGGATTTGAGCGAGAATGAGCTGGTGGGACCTATCCCTCCAATGCTTGGCAATTTATCTTTTACCGGAAAGCTGTACCTCCATGGAAACTTGCTTTGCGGTCCTATTCCGCCAGAGCTTGGCAATATGTCTAAATTAAGTTATTTGCAGTTGAATGACAACCAATTAGTTGGCAAAATTCCTGTAGAACTTGGAAGGCTTGAACATTTGTTTGAATTGAATCTTGCCAACAATCATCTTGAGGGACCAATTCCACATAACATCAGCTTATGCTCAGCCTTGAATCAGTTCAATGTGCATGGTAACCACTTGAGTGGATCCATTCCTCTGAGTTTTAGAACTCTTGAGAGTTTGACTTACCTAAATTTATCTGCTAACAACTTCAAGGGGAGCTTACCTGATGAACTGGGCCATATCATAAATCTTGATACACTGGATCTGTCGAGCAATAACTTTTCAGGTCCAGTTCCTTCATCTGTTGGTGACTTGGAGCATCTCTTGACCTTGAACCTGAGCCATAACCTTCTTGATGGTCCGTTGCCTGCTGAGTTGGGGAATTTGAGAAGCATACAGATTATTGATATTTCATACAACAGTCTTTCAGGTAGTATCCCTGTGGAAATGGGTCAACTGCAGAACCTTGCATCTCTGATACTGAACAACAATGGTTTGCATGGGAGAATTCCAAATCAGCTATCTAATTGCCTGAGTCTCTCCTCCCTAAATGTTTCATACAATAATTTATCTGGAACTATTCCTCCTATGAGGAATTTTTCACGGTTTTCAGCCGACAGTTTCACTGGAAATCCATTACTATGTGGGAAAAAGTTGGGATCATTTTGTGGTCCTTACATATTAAAATCCAGAGGTCCCCCCAAACTTGTAATTCTTCATATGGATATGGCAATTCATACCTTGAATGATATATTGGGAGCTACTGAGAATCTCAGTGAGAAATATATCATTGGGTATGGTGCCTCTAGTACAGTTTACAAGTGTAATTTAGAAGGTTCTGGGCCAATCGCAATTAAGCGACTTTACAACCAGCATCCACACAATTTGCGAGAATTTGAAACAGAACTTGAGACTGTTGGCAGCATCAGACATAGAAACCTTGTCACTTTGCATGGTTATGCACTGACCCCCAATGGAAATCTCCTATTCTATGACTACATGGAGAATGGTTCTTTGTGGGATCTTCTTCATGGTTCCTTGAAGAAGGTAAAACTTGGCTGGGAAACACGATTAAGGGTTGCTGTAGGTGCTGCTGAAGGAATCGCTTATCTCCATCATGATTGCAACCCTAGGATTATTCACAGGGATATTAAATCCTCAAATATTTTGCTGGATGAGAACTTTGAGCCTCATATTTCTGATTTTGGTATTGCAAAAAGCATATCAACAACAAGAACTCATGCGTCAACTTTTGTACTTGGAACCATTGGTTATATTGATCCTCAGTATGCCCAGACTTCTCGGTTGAATGAAAAATCAGATGTCTACAGCTTTGGCATTGTTCTACTAGAGCTACTAACTGGGAAGAAAGCAGTAGATAATGAGTCTAACTTGCTACAATTGATATTGTCCAAGGCAGATAACAACACAGTAATGGAAGCTGTGGATCCAGAGGTGTGTGTGACCTGCTTGGATCTAGCCTGTGTGAAGAAGACCTTTCAGCTTGCTCTGCTATGCACGAAAAGAAACCCTTCTGAGAGGCCTACCATGCATGAAGTTGCAAGAGTATTGGCGTCGTTACTTCCTACCCCGACTAACAAGGTGGCCACTGCCCCGGCAAAGATGGCTGATTTTGCACAATTTTTGATAGACCAGGGACGATGTCAAAGGTTAGAGTTGGTGCAACCGAAGCAGGAGAATAATAACTCTTCTGATGCTCATTGGTTTGTTACCTTCGGAGATGTATCCAAGGACACCCCCTAA 2763 0.4213 MEDPTPVLFRTGKQGMQVKLFLAMALFLFLCSFASSLDDEGQTLMAIRASFSNAANELLDWDGVPNDDFCSWSGVYCDQTGDTVLTLNLSSLNLGGEISPAIGELRSLQSIDLSDNQLYGDVPFSLSKLKQLEFLNLKNNQLTGPIPSTLSQIPNLKTLDLARNQLSGEIPRLLYWNEVLQYLGLRGNNLTGTLYPDICQLTGLCDVRGNNLMGTIPESIGNCTSFEILDLSYNQLSGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPMLGNLSFTGKLYLHGNLLCGPIPPELGNMSKLSYLQLNDNQLVGKIPVELGRLEHLFELNLANNHLEGPIPHNISLCSALNQFNVHGNHLSGSIPLSFRTLESLTYLNLSANNFKGSLPDELGHIINLDTLDLSSNNFSGPVPSSVGDLEHLLTLNLSHNLLDGPLPAELGNLRSIQIIDISYNSLSGSIPVEMGQLQNLASLILNNNGLHGRIPNQLSNCLSLSSLNVSYNNLSGTIPPMRNFSRFSADSFTGNPLLCGKKLGSFCGPYILKSRGPPKLVILHMDMAIHTLNDILGATENLSEKYIIGYGASSTVYKCNLEGSGPIAIKRLYNQHPHNLREFETELETVGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGSLKKVKLGWETRLRVAVGAAEGIAYLHHDCNPRIIHRDIKSSNILLDENFEPHISDFGIAKSISTTRTHASTFVLGTIGYIDPQYAQTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLLQLILSKADNNTVMEAVDPEVCVTCLDLACVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPTPTNKVATAPAKMADFAQFLIDQGRCQRLELVQPKQENNNSSDAHWFVTFGDVSKDTP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2607 920 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
Acco02g2607 920 SUPERFAMILY RNI-like 206 529 - -
Acco02g2607 920 SUPERFAMILY Protein kinase-like (PK-like) 569 857 IPR011009 -
Acco02g2607 920 Pfam Leucine rich repeat 416 475 IPR001611 GO:0005515
Acco02g2607 920 Gene3D Ribonuclease Inhibitor 203 248 IPR032675 -
Acco02g2607 920 FunFam Leucine-rich repeat receptor-like kinase 40 149 - -
Acco02g2607 920 Gene3D Transferase(Phosphotransferase) domain 1 667 878 - -
Acco02g2607 920 ProSiteProfiles Protein kinase domain profile. 591 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2607 920 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Acco02g2607 920 Pfam Leucine Rich repeats (2 copies) 130 166 IPR025875 -
Acco02g2607 920 SMART serkin_6 591 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2607 920 Pfam Protein kinase domain 594 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2607 920 Gene3D Ribonuclease Inhibitor 249 558 IPR032675 -
Acco02g2607 920 Gene3D Ribonuclease Inhibitor 36 202 IPR032675 -
Acco02g2607 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Acco02g2607 920 Pfam Leucine Rich repeat 222 239 IPR001611 GO:0005515
Acco02g2607 920 SMART LRR_typ_2 390 414 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 486 510 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 129 152 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 153 177 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 438 462 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 342 366 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 270 294 IPR003591 -
Acco02g2607 920 SMART LRR_typ_2 105 126 IPR003591 -
Acco02g2607 920 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 667 868 - -
Acco02g2607 920 SUPERFAMILY L domain-like 68 246 - -
Acco02g2607 920 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 562 666 - -
Acco02g2607 920 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 177 285 - -
Acco02g2607 920 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 574 860 - -
Acco02g2607 920 Gene3D Phosphorylase Kinase; domain 1 562 666 - -
Acco02g2607 920 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Acco02g2607 920 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 286 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2607 Acco-ChrAcco02 24720642 24729237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2607 86 919 Receptor kinase-like Gene Family AT5G07180 70.568 0.0 1204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Acco02g2607 Pkinase 1.1e-40 CL0016