Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2573 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATTGCCGAGAAGAAGTTTATTGCAAAGGACATCTTGGGTGCGAAGAAGTTTGCTTTAAAGGCCCAAAGACTGTTTCCTGAGCTTGAGGGTATTTCTCAAATGCTAGCAACACTTGATGTGTATATTTCTGCAGACAATAAAATAACTGGCGAAGCAGATTGGTATGGTATACTTGGTGTAGATCCTCGGGCTGACGATGAAACAATCCGTAAACAATATAGGAAGTTGGCTCTCACGCTTCATCCTGATAAGAACAAGTCTATTGGAGCTGATGGGGCATTTAAGCTTATTTCGGAGGCATGGAGTTTGCTGTCAGATAAGGCTAAAAAGATTGTATATGATCAGAAGAGAAACACCAAAGTGCGGAAAGTTTCAACAAAGTCTTCTGGTGCATCCGCACATCCAGGGACTAATGGGAATTACAATTTTACAAAAACTGCCACTTCAAGTGCCAAACCTCATAAACATACTACTAAACCAGCCTCAACTTATACTCACAAGTCAAAATCAAATACTTTTTGGACTGTTTGCAATCGATGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAATTTGAAACTCCTCTGTCCCAACTGCCATGGGGCATTTTTGGCTGTAGAAACAGCTCCTCCACCTGCAAGTGGTGTAAGACCTGCCGCCTCATTTAATTTTTCCAAGCAGCAGCAAAAGTTTGATGACCAAGTGCCTAGTAAAAACAAATCAAATGCAGGAAAGAACAAGCCAACCAAAAATGTTGGAGCATCCTATAACCATGCTGATTTCCAGTGGGCTCCATTTTCTAAAACTTCTGGTGTTTCAACAGCAGCTCATGCTGCAAGTATGGTTCAACAGGCATATGAGAAAGTGAAGCGAGAGCGTGAGGAGGCACAAGCGGCTAAAAAAAGGGAACAGGCCTTACGAAGGAAGCAGCATGCTTCTAAAAAAGGTTATATGAAACCCACAAAGAGAAAAAGAGGCATGGAGGATTCTGGTGGGAGCAGCCATGGCGTAGTAGGGGCAGGGAGCTCATGGGGTTCTAAACCTGGTAATCTTGATCACATCTCAATTGATGGTACCATGAAGACCAGTGGATCAGGAGTTTCCCAGCTTGAGCTTAATAATCTTCTCATGGTGAGAGCTAGAAATGAAATTGACAAGAAACTGAAGGATATTCAGACAAATACTGTTTCCAAGAGAGCTGTGGCAGAGAGTGGAAATGGATATGAGAAAGAAAGTGAGAAAGGAGAAAAATTTATGTGTACCTCAGAGAGATGTGATCAAAACAACCTCTTTAAGTCTGACAATAGGAATAGTGAGTTCCATGCCATCAAAGCTTCTGCTGGGGCTACTATTGCTAATGTGGACATGAAAACAGTGACAATTGATATCCCTGATCCTGATTTTCATGATTTTGATAAGGATCGAACTGATAGGTCCTTTGGTGAAAATCAAGTATGGGTTGCATATGATGATGATGATGGAATGCCTCGAATTTATGCTATGATTCAGAGTGTGATTTCTTTGAGTCCATTAAAGATGCGGATCAGTTGGCTCAACTCAAAGACCAACGAAGAACTGGCCCCGCTAAATTGGATCATTTCAGGCTTTTCTAAAACTTGTGGGCAGTTTAGAATGGGTAGATGTGAAATCAATAACTCAGTTTATTCTTTTTCTCATAAGGTTAGATGGAGAAAAGGTGCCCATGGAGCCATTTGTATTTATCCCTTGAAAGGGGATGTTTGGGCTCTTTATAGGAACTGGTCACCTGATTGGAATGAGCTGACATCAGGTGAAGTGATACGCAAGTATGATATGGTTGAGGTACTTGGGGATTTTAGTGAAGAAAATGGTGTTATGGTCATTCCCCTGGTAAAAGTGGCTGGTTTCAAGACATTATTTCACCGGCACTTGGACGCAAGAGAAATTATGACCATTCCAAGAGAAGAGATGTTTCGGTTCTCTCATCAGGTCCCGTCATACTTACACACAAATAAAGAAAAACCAGATGTCGTGAGGGGTTGCTGGGAGTTGGACCCGGCTGCTACTCCATCTGAACTTCTTGAGGTTATAGAAGCTGTTAAAGAGGAAGACATGGAAGGCATGGAGGATAATCCCGTAGAAGAAGCGCAGAATGATGACAACAAACGACCTAGTGATGAGGAAATGATAAATTATACAGGAAAAGGTGGGAATGAGAAGGAGAAAAATGATAAAGATACTCAGGAAATTGGAACGTTGGAAGAGGACAGATAG 2295 0.4166 MECNKDEATRAKEIAEKKFIAKDILGAKKFALKAQRLFPELEGISQMLATLDVYISADNKITGEADWYGILGVDPRADDETIRKQYRKLALTLHPDKNKSIGADGAFKLISEAWSLLSDKAKKIVYDQKRNTKVRKVSTKSSGASAHPGTNGNYNFTKTATSSAKPHKHTTKPASTYTHKSKSNTFWTVCNRCKMQYEYLRVYLNLKLLCPNCHGAFLAVETAPPPASGVRPAASFNFSKQQQKFDDQVPSKNKSNAGKNKPTKNVGASYNHADFQWAPFSKTSGVSTAAHAASMVQQAYEKVKREREEAQAAKKREQALRRKQHASKKGYMKPTKRKRGMEDSGGSSHGVVGAGSSWGSKPGNLDHISIDGTMKTSGSGVSQLELNNLLMVRARNEIDKKLKDIQTNTVSKRAVAESGNGYEKESEKGEKFMCTSERCDQNNLFKSDNRNSEFHAIKASAGATIANVDMKTVTIDIPDPDFHDFDKDRTDRSFGENQVWVAYDDDDGMPRIYAMIQSVISLSPLKMRISWLNSKTNEELAPLNWIISGFSKTCGQFRMGRCEINNSVYSFSHKVRWRKGAHGAICIYPLKGDVWALYRNWSPDWNELTSGEVIRKYDMVEVLGDFSEENGVMVIPLVKVAGFKTLFHRHLDAREIMTIPREEMFRFSHQVPSYLHTNKEKPDVVRGCWELDPAATPSELLEVIEAVKEEDMEGMEDNPVEEAQNDDNKRPSDEEMINYTGKGGNEKEKNDKDTQEIGTLEEDR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2573 764 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Acco02g2573 764 Gene3D DnaJ domain 63 181 IPR036869 -
Acco02g2573 764 Pfam Domain of unknown function (DUF3444) 474 680 IPR024593 -
Acco02g2573 764 SUPERFAMILY Chaperone J-domain 63 133 IPR036869 -
Acco02g2573 764 PRINTS DnaJ domain signature 68 86 IPR001623 -
Acco02g2573 764 PRINTS DnaJ domain signature 86 101 IPR001623 -
Acco02g2573 764 PRINTS DnaJ domain signature 102 122 IPR001623 -
Acco02g2573 764 SMART dnaj_3 65 122 IPR001623 -
Acco02g2573 764 Pfam DnaJ domain 66 127 IPR001623 -
Acco02g2573 764 MobiDBLite consensus disorder prediction 306 360 - -
Acco02g2573 764 MobiDBLite consensus disorder prediction 318 335 - -
Acco02g2573 764 MobiDBLite consensus disorder prediction 711 764 - -
Acco02g2573 764 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Acco02g2573 764 MobiDBLite consensus disorder prediction 241 268 - -
Acco02g2573 764 CDD DnaJ 66 119 IPR001623 -
Acco02g2573 764 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Acco02g2573 764 Coils Coil 293 323 - -
Acco02g2573 764 MobiDBLite consensus disorder prediction 722 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2573 Acco-ChrAcco02 24236896 24239190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2573 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.470 1.10e-33 131