Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2567 ATGCACAATAAGGATTTTCTACTCCAGATATTGAAATTACTGTCAGAGAAATTTATGAAGCATATTGCATTTCTGACTGATGAAAGACTTGTGTTTGCCGTGGTTCTCTTATTTCTCATTTCTTGTATTGAGATCAAACCTGATCGTAATAATTTTCGGTTTTTATCAAGTGACTCTGCCAGGGTCAATGCCAGCATGCCTGCCATGAAGGTTAATTCTGAGCAGACTCGGTTAGGTTGTGTATTCAACAAGTTGGTGAATGAGATAGGAGATCCTGTTGATTTTGAACTTCCAGATTGGATTAATAAGTCGAAGGCAGTGCCTTACGTCTCTATAAAGCGCAATATATATCTCACAAAGAAGGTAAAGAGAAGGCTTGATGATGATGGCATATTCTGTTATTGTACTACATCCCCTGGGTCTTCAGGTGTTTGTGGTAAATACTGTCAGTGTGGGATGCTTATGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGAGTTCTTGTCTCAATAAACCATTTCAGCATCGACCAACAAAAAAGATGAAATTGGTTCAGACTGAGAAGTGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCGAGGGGACTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGCGAACAAAGGCTTTGGAATATGAAACATCGTGGGGAGACGAACTTCTACTTATGTGAAATTAACAGAGATATGGTGATTGATGCAACATACAAGGGGAACAAATCAAGATATATAAATCATAGTTGCTGCCCCAATACAGAGATGCAGAAATGGTTGATTGATGGTGAAACAAGAATTGGTATATTTGCAACGCGTGACATAACGAAGGGCGAGCATCTTACTTATGATTATCAGTTTGTTCAATTCGGTGCAGATCAAGATTGCCACTGCGGTGCTGCTGCGTGCAGGCGTCAGTTGGGGGCCCGATCTAACAAGCCTAAAACATCATCTGATGCATATCAGGTGGATGCATACTCTCTAGTTAATCAGAATGGAGGTTTGCATATTGGACATTCTCATGCGATCGGTGCACCAAAGTACACGCACTATTGCATTGGACAAGTTATCAGGATAAATCACCCCACAAAACAGAGGTGGTGTTTTGGGATGATAAAGCAGTTCGATAAATATTCCCAAAAGCACACTATTATGTTTGAAGATGGTGATGTTGACTTTATTGACATGTCAGAAGTAGATTGGGAATTGGTGAGATTGTGA 1251 0.4021 MHNKDFLLQILKLLSEKFMKHIAFLTDERLVFAVVLLFLISCIEIKPDRNNFRFLSSDSARVNASMPAMKVNSEQTRLGCVFNKLVNEIGDPVDFELPDWINKSKAVPYVSIKRNIYLTKKVKRRLDDDGIFCYCTTSPGSSGVCGKYCQCGMLMSSCSSGCKCGSSCLNKPFQHRPTKKMKLVQTEKCGSGIVADEDIKRGDFVIEYVGEVIDDKTCEQRLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWLIDGETRIGIFATRDITKGEHLTYDYQFVQFGADQDCHCGAAACRRQLGARSNKPKTSSDAYQVDAYSLVNQNGGLHIGHSHAIGAPKYTHYCIGQVIRINHPTKQRWCFGMIKQFDKYSQKHTIMFEDGDVDFIDMSEVDWELVRL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2567 416 SMART shorttest3 128 178 IPR006560 GO:0005634|GO:0042054
Acco02g2567 416 CDD Tudor_Agenet_AtEML-like 363 413 - -
Acco02g2567 416 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 370 IPR025787 -
Acco02g2567 416 CDD SET_ASHR3-like 180 318 - -
Acco02g2567 416 ProSiteProfiles AWS domain profile. 128 177 IPR006560 GO:0005634|GO:0042054
Acco02g2567 416 ProSiteProfiles Post-SET domain profile. 302 318 IPR003616 -
Acco02g2567 416 SUPERFAMILY SET domain 106 314 IPR046341 -
Acco02g2567 416 FunFam Histone-lysine N-methyltransferase 95 334 - -
Acco02g2567 416 Pfam SET domain 190 295 IPR001214 GO:0005515
Acco02g2567 416 PANTHER SET DOMAIN PROTEINS 60 333 - -
Acco02g2567 416 Gene3D SET domain 98 335 IPR046341 -
Acco02g2567 416 ProSiteProfiles SET domain profile. 179 296 IPR001214 GO:0005515
Acco02g2567 416 SMART set_7 179 302 IPR001214 GO:0005515
Acco02g2567 416 SMART PostSET_3 302 318 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2567 Acco-ChrAcco02 24139371 24149245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2567 152 314 C2H2 Transcription Factor Family AT2G23740 34.426 4.42e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco02g2567 SET 4.4e-19 No_clan