Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2566 ATGGTCGTTTGCGGTGGGAAGCCATTGAAGCGGATGAAGAGGAGAGTCACGGCTGATTTCTACGATTTTCTCACGTTCCCGTCCCCTTCAGTCGCTGGAGAAGATTTCTCTGGTGGACCGTTCCGGACGAACGTGAGATCTTTTCTGTCGAAGCACGCGCTGCTCCCACCGCCTTCGGCTCTGTTCCCTCACCTCATGACGTGGCAGATCCTGTTCCGAGTCGGTGATCTGACGGACGGCCCTGAATCGAGTCCAGCGGTGGTTTGCCTCGATGTTGTCGAAGAGGATGTGGTCAGATCTAGATCCGTCTACTGCGATCAGTGCCGAGTTGTTGGTTGGAGCGGCCATCCAGTATGCGGAAAACGGTACCATTTTATAATCAAAGCTGATGGTACTTCCATTGGTGGGTACCACAAGCCATGTATGTGCTGTGGAGACATCTTGCACTTGTCAGAATCCAAGTGCAAGTCATGCAACCATGTGACGACCACGGATGATGTTGAAGATTGGGTCTATCACCAATTAGAAAGCACAACTCATCTTTTACATGGTGTAGTCCATGCTAATGGTTATGGTCACCTTCTTCGAGTTAATGGCAGAGAAGGTGGCTCAAAATTTCTTTCTGGGTGCCATATCATGGACTTCTGGGATCGCCTCTGCCAGACACTTGGAGTTAGAAAAGTTAGCGTGATGGATGTGTCAAAGAAGTATGGGTTGGAGTACCGGCTACTCCATGCTATTACTAAAGGACATCCGTGGTATGGTCATTGGGGTTATGAATTTGGTTCTGGTAGCTATGGTCTTACTCATGAATCATACAAGTCTGCTGCAGAATTTCTGTCCAATATGCCCTTGTCCGCCTTTCTTTACCCGGGGCAGAAATGTGATTCTTGTGTGCAAGACATGATCTCATATTACCAGTCTTTGTCAAAGAATGTGCTTGTAAATATAGGGGACCTCTTTTGTTTTTTACTGGGTTTGATTCATGATGCTCGCAAGACTGCTGCATCAAAGAATGTTGATGACATCACCGGTAAGAAGCGACGAGTGAATGCTACAGGACTGTCCTCTTCATGGACTAAAAGTGACATTGAATGTGTGGAGGAGGCCATGCTCAGAGTGCTGCGAGCTGTGTCTGGGTCCAATTGGGTGAGCTGGCGTGCTTTAAGGGGTGCTGTCTGCAAGGTAGCCTCTCCAGAACTGCTTGATCATTGCCTTGGAGAATTGGGAGGAAAAGTGGTCCTTGGTGCAATGGTGAATACCCGATGCAATCCTGTTACTGGTGCTTTTGAGTACAGACTAGAGACAGTGAACAATTCTCGCAATGAAATTGCGAGCAACATTTCTTCAGGCCTAAAGTATCCATCTGAAGTGACTCTTCTCCATGACTTGAGATACTTTTATAATTCCCTTCTTCATCCTCAGATGATGTTGAGCTATGATCCAGGGGAGACAAAGGCAATTGCCATGAGCTCTGCTCAGAAACTTATTGACTGCAAGCAGTTTGTAAAGGACTTTAAACCCGAGACATTGCTGCTGGCAAACCTGTCTAAGATACGCTTCTCATGTCAAATAGAACTAGAAGATGAATCTGAAGATTTTGCCGCACACCTTCCTCCAGAATTAGTTATCCTCCCTGTTAATGCCACTATATCTGAACTCAAGCTTGAAGCGGCAAATGCTTTTCAAGATGTATATGTCATGTTCAGAAGACTTCAAATTGATGAGCTACTAGGCTATAATGTCGATGATTCCTCCCAGGTCAAGCACTTGTGTGGATCTATGTCCAACGCAGTCCGGCTGCGAGGAAAATGCATTGGCAAGAATGGGTTGAGCAAATTCCAAATGGAACGGGGCACGGAGAGGTGGACTGTGGATTGCAGCTGTGGGGTCAAGGACGATGATGGCGAGAGAATGTTGGCTTGTGACGTTTGTGGAGTGTGGAGACACACAAGGTGCTCTGGTATTCATGACGCAGATCCTGTTCCTGCGCGGTTTGTTTGTCCAAAGTGCCAAAACTGTGAGCCCAAACCCAAACCAAATGGACCCTGCGAGGATGACATTGTGAATGGTATTACCTCTAACAAGAACTGCTTGCTGGTGGCATCTGATGTTCGTTGA 2121 0.471 MVVCGGKPLKRMKRRVTADFYDFLTFPSPSVAGEDFSGGPFRTNVRSFLSKHALLPPPSALFPHLMTWQILFRVGDLTDGPESSPAVVCLDVVEEDVVRSRSVYCDQCRVVGWSGHPVCGKRYHFIIKADGTSIGGYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLESTTHLLHGVVHANGYGHLLRVNGREGGSKFLSGCHIMDFWDRLCQTLGVRKVSVMDVSKKYGLEYRLLHAITKGHPWYGHWGYEFGSGSYGLTHESYKSAAEFLSNMPLSAFLYPGQKCDSCVQDMISYYQSLSKNVLVNIGDLFCFLLGLIHDARKTAASKNVDDITGKKRRVNATGLSSSWTKSDIECVEEAMLRVLRAVSGSNWVSWRALRGAVCKVASPELLDHCLGELGGKVVLGAMVNTRCNPVTGAFEYRLETVNNSRNEIASNISSGLKYPSEVTLLHDLRYFYNSLLHPQMMLSYDPGETKAIAMSSAQKLIDCKQFVKDFKPETLLLANLSKIRFSCQIELEDESEDFAAHLPPELVILPVNATISELKLEAANAFQDVYVMFRRLQIDELLGYNVDDSSQVKHLCGSMSNAVRLRGKCIGKNGLSKFQMERGTERWTVDCSCGVKDDDGERMLACDVCGVWRHTRCSGIHDADPVPARFVCPKCQNCEPKPKPNGPCEDDIVNGITSNKNCLLVASDVR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2566 706 CDD PHD_MMD1_like 626 671 - -
Acco02g2566 706 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 13 680 - -
Acco02g2566 706 SMART PHD_3 626 672 IPR001965 -
Acco02g2566 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 611 676 IPR013083 -
Acco02g2566 706 Pfam PHD-finger 627 674 IPR019787 -
Acco02g2566 706 ProSitePatterns Uncharacterized protein family UPF0054 signature. 183 193 IPR020549 -
Acco02g2566 706 SUPERFAMILY FYVE/PHD zinc finger 616 673 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2566 Acco-ChrAcco02 24120515 24125559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2566 84 671 PHD Transcription Factor Family AT5G22260 30.161 1.59e-88 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco02g2566 PHD 2.1e-07 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g2566 02 24120515 24125559 Acco02g2566 02 24120515 24125559 ECH