Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2561 ATGGCCACCTCCAGGCGGCTTAGGGCATTCAAGCGATGGATGGCATCCCGGGGTTTCGAAATCAGCGATGGCCTGGAGTTCGTAGACGATCCTGAAAATGGAATTGCGGTGAGCGCTTTGTGCCAATTGAAGGAAGGCGATGTTATTGCCAAAATACCCAAGGATGCTTGCCTGACGATTAAGACTAGTGGGGCGAGTCAAATGATTGAACACTCTGGTTTGCATGGTAAGTTGGGAGTAGCAGTGGCTCTCATGTATGAGAGAAGCTTGGGCGAGAAGTCTCCCTGGGCTGGCTACTTTCAGCTTTTGCCTCACCATGAGTGCCTGCCGTTAATGTGGACTCTGAACGAAGTAAACGAGCTTTTGAGTGGGACTGAGCTACACAAGACAGTGCAAGAGGACAAAGCTATTATGTATGAGGACTGGAAAGAGAATATTCTGCCCATCTTGGATTTTTTACCTTCGAAGCTTAAACTGGAATATTTTGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTATTGCTTCACGAGCTTTTGAGATAGATGATTACCATGGCTTTGGCATGGTTCCCTTGGCAGACCTATTCAATCATAAAACAGATGCTGAGGATGTGCATTTCACCGCTGTATCCTCAAACTATGAATCTGACAATGATGATGATGATGATGATGGAAATGAGTGTGTCACAGATGAGGAACTGGCAAAAAGTTCTTTGGATGAACCTGAATTGAATCCTGCTCTTACTGGGAAATGCAGTGGTGGCAACTTGGAGTCGTCCTCGGTTGTGGGAGATGATCCTTCAATGTTGGAGATGATTATGATAAAAGATGTCAGCATTGGAGCTGAGGTATTTAACACCTATGGGTCAATGGGTAATGCTGCTTTACTTCATAGATATGGATTCACTGAGCAAGATAACCCCTATGATATTGTCAACATTGATTTGGAACTGGTTCTTCAGTGGTGTTCTTCTATGTTTTCAGCTCGATACACTCGAGCAAGAGTCTCTTTCTGGAGAAAGCTGGGCTATTCTGCATGCATCAGCCAAAACTCAGAATATTTTGAGATATCATCTGATGGAGAACCACAGATTGAACTCCTGATTCTATTATACATTATGTTATTGCCAGAAGATGTGTACAATAAGTTAGACTTGTTGGTGTCAGTTGCAGGAAATATTCATGAATCAAGTGAAACTTCTCTATCAGGAGATTGCAATATCTTGACAAAGAAAGCATCTGATATGAGTAAGGAATCCTTGCTGTCTAGAAAAGTTTGTGATGCTCTGTTGGCTGTTGCTGATATGCGTGAAAGTCTCTATGGTCTGAACTCAATAGAAGATGATATTGAGGCATTAGGAAGGTGTGACTGTGTTAGAGAAAGAAAGCTGTTTCATTCTTTGGTTCTGCGCATCAGTGAAAGGAAGATCCTTGAAAAGCTCAGAAATTATGCTGCCCGGCCAAATAGGATTGCGAAGAGAAATTCTGCAAGGAAGAAATAA 1503 0.4258 MATSRRLRAFKRWMASRGFEISDGLEFVDDPENGIAVSALCQLKEGDVIAKIPKDACLTIKTSGASQMIEHSGLHGKLGVAVALMYERSLGEKSPWAGYFQLLPHHECLPLMWTLNEVNELLSGTELHKTVQEDKAIMYEDWKENILPILDFLPSKLKLEYFGVEEYFAARSLIASRAFEIDDYHGFGMVPLADLFNHKTDAEDVHFTAVSSNYESDNDDDDDDGNECVTDEELAKSSLDEPELNPALTGKCSGGNLESSSVVGDDPSMLEMIMIKDVSIGAEVFNTYGSMGNAALLHRYGFTEQDNPYDIVNIDLELVLQWCSSMFSARYTRARVSFWRKLGYSACISQNSEYFEISSDGEPQIELLILLYIMLLPEDVYNKLDLLVSVAGNIHESSETSLSGDCNILTKKASDMSKESLLSRKVCDALLAVADMRESLYGLNSIEDDIEALGRCDCVRERKLFHSLVLRISERKILEKLRNYAARPNRIAKRNSARKK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2561 500 Gene3D set domain protein methyltransferase, domain 1 3 302 - -
Acco02g2561 500 Pfam SET domain 34 289 IPR001214 GO:0005515
Acco02g2561 500 PIRSF RMS1_SET 1 488 IPR011383 GO:0016279|GO:0018026
Acco02g2561 500 CDD SET_LSMT 24 303 - -
Acco02g2561 500 ProSiteProfiles SET domain profile. 23 289 IPR001214 GO:0005515
Acco02g2561 500 SUPERFAMILY SET domain 4 208 IPR046341 -
Acco02g2561 500 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 450 - -
Acco02g2561 500 SUPERFAMILY SET domain 266 307 IPR046341 -
Acco02g2561 500 Gene3D - 305 497 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2561 1 500 NAC Transcription Factor Family AT3G56570 56.900 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco02g2561 SET 3.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g2561 02 24041783 24045287 Acco02g2561 02 24041783 24045287 ECH