Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2556 ATGGAGAACGAAAATAATCTGAATCATGGCGAAGTTGTGAATGACATTGAAAACGAAGCTCCGTTGGATGGGAATGACACTAGGAGATACTTGTCAGAGTTTTCTGAAAGAAACATGTCATACACACAGCCACTTCTGGTTAAGAGGACTAACACCACCTCGCAGATCGCCATAGTTGGTGCCAACCTTAGCCCCATTGAAAGTCTTGATTATGAGATGTTTGAGAATGAAATATTTAAGCAGGACTGGAGATCCAGGAGCAAGATTCAGATATGCCAGTATGTGATACTTAAATGGGGATTTGCTGCTCTTATTGGACTAGGAACTGGGCTACTTGGTTTCTTCAGTAATATTGCCGTTGAGAATATTGCTGGTTTCAAGCTGCTTCTGGTATCCGATCTCATGTATAAACAAAGATTTATTCTAGCATATGTAGCATTAGCTGGTTGCAATATATGTTTGGCGGCGGCGGCTGCATCTCTCTGTGCTTTCATTGCCCCTGCAGCAGCAGGCTCTGGTATTCCTGAGGTAAAAGCCTACCTCAATGGTATTGATGCTCACAGTATACTGGCTCCAAGCACTCTTTTTGTGAAGGTTTTTGGTTCCGTGCTTGGAGTTTCTGCTGGATTTGTTGTGGGCAAAGAAGGGCCTATGGTACACACAGGTGCATGCATTGCCTCCTTGTTAGGGCAGGGTGGATCCCGCAAGTATCGCTTAACTTGGAACTGGCTAAGGTATTTCAAAAATGATCGGGACCGGCGGGACATGATTACTTGTGGTGCTGCAGCTGGTGTTGCTGCTGCATTTCGTGCTCCTGTAGGCGGCGTTCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGCGGAGTGCTCTCCTTTGGAGGACATTTTTCACTACAGCTATAGTTGCTATGGTTTTGAGAGCCGGAATTCAGTACTGTGCCACTGGGAAATGTGGGCTATTTGGCGAGGGTGGTTTGATTATGTACGATGTCAGTGCAGCCAATGTAACATACCGTGGTGCTGATGTACTTGCGGTGTTACTCTTAGGAGCCCTCGGAGGCGTTCTCGGAAGCATATATAATTACCTTGTGGATAAGGTTGTTCGTACATATAGCATCCTTAATGAAAAAGGTCCAGGTTGCAAGATTCTCATTGCTGTCACAATTGCTTTCTTGACATCATGTTGTGCGTACGGCCTACCATGGTTGGTGACGTGCATCCCGTGTCCTGATGATCCTTCGGTGAGCTGTCCCACTGTCTATGAGTCTGGCAACTACAAGAACTTCCATTGTTCGCCAGGACATTACAATGATCTCGCTTCTCTTTTCCTAAACACTAATGATGATGCTATTCGCAACCTATTCAGTACCAGGACATTCAAAGAGTTCCACATCTCCAGTCTCTTTATCTTCTTTGTAACTATTTATTTTCTTGGGGTTATCACATATGGTATTGCTGTTCCGTCTGGGCTTTTCATTCCTGTGATATTGGCTGGCGCTGCGTATGGCCGGCTCGTTGGAAGATTATTTGAATCGATTTCAAAGCTTGATACCGGTCTATACGCCCTCCTTGGAGCTGCCGCTTTCCTTGGTGGCACCATGAGAATGACGGTGTCTCTTTGTGTTATATTGTTAGAACTCACCAATGATCTCTTGTTACTTCCTCTCGTGATGTTGGTCTTGCTAATCTCAAAAACTGTGGCTGATGGCTTCAACAAGGGTGTGTACGATCAAATACTGAAGATCAAAGGACTTCCATATATGGAGGCCCATGCAGAACCTTATATGAGGAATTTAGTCGCACGAGATGTTGTCACTGGTCCACTTGTCACTTTCTCTGGCATTGAAAGGGTAGGGAATATACTACATGTTCTGAAAACCACTGGGCATAATGGGTTTCCTGTCATCGATGAACCACCATTCTCAGATGCACCGGAGTTGTGTGGGCTTGTTCTTAGGTCTCATCTGCTAGTGCTATTGAAGGGGAAGAACTTTACAAACGACAAGGTGCTTACAAGTGAAAACATCTTACAGAGACTTTCTGCATTAGATTTTGCAAAGGCAGGATCAGGGAAAGGGATCAAACTAGAGGATCTAGATATTGAAGAGGAAGAGGTGGATATGTATGTTGATCTCCACCCTATTTCCAATGCATCCCCATACACGGTTGTTGAGACCATGTCCCTTGCTAAAGCCGCCATTCTTTTCCGCCAACTTGGTCTAAGGCACATGTGCGTGGTCCCGAAGAGTCAACACAGACCTCCAGTTGTTGGGATTCTGACACGCCATGACTTCATGGAGGAGCATGTCCATGAACTTTACCCTAATATGAAACCTAGCAGGTGGACTGAGTGA 2355 0.4535 MENENNLNHGEVVNDIENEAPLDGNDTRRYLSEFSERNMSYTQPLLVKRTNTTSQIAIVGANLSPIESLDYEMFENEIFKQDWRSRSKIQICQYVILKWGFAALIGLGTGLLGFFSNIAVENIAGFKLLLVSDLMYKQRFILAYVALAGCNICLAAAAASLCAFIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKVFGSVLGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYRLTWNWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAIVAMVLRAGIQYCATGKCGLFGEGGLIMYDVSAANVTYRGADVLAVLLLGALGGVLGSIYNYLVDKVVRTYSILNEKGPGCKILIAVTIAFLTSCCAYGLPWLVTCIPCPDDPSVSCPTVYESGNYKNFHCSPGHYNDLASLFLNTNDDAIRNLFSTRTFKEFHISSLFIFFVTIYFLGVITYGIAVPSGLFIPVILAGAAYGRLVGRLFESISKLDTGLYALLGAAAFLGGTMRMTVSLCVILLELTNDLLLLPLVMLVLLISKTVADGFNKGVYDQILKIKGLPYMEAHAEPYMRNLVARDVVTGPLVTFSGIERVGNILHVLKTTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKGKNFTNDKVLTSENILQRLSALDFAKAGSGKGIKLEDLDIEEEEVDMYVDLHPISNASPYTVVETMSLAKAAILFRQLGLRHMCVVPKSQHRPPVVGILTRHDFMEEHVHELYPNMKPSRWTE 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2556 784 ProSiteProfiles CBS domain profile. 715 780 IPR000644 -
Acco02g2556 784 Gene3D - 589 773 IPR046342 -
Acco02g2556 784 CDD CBS_pair_voltage-gated_CLC_euk_bac 601 768 - -
Acco02g2556 784 PRINTS Chloride channel signature 537 556 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 PRINTS Chloride channel signature 198 217 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 PRINTS Chloride channel signature 487 507 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 PRINTS Chloride channel signature 262 281 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 PRINTS Chloride channel signature 167 184 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 PRINTS Chloride channel signature 519 535 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 PRINTS Chloride channel signature 575 589 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 SMART cbs_1 719 770 IPR000644 -
Acco02g2556 784 SMART cbs_1 608 661 IPR000644 -
Acco02g2556 784 SUPERFAMILY CBS-domain pair 592 768 IPR046342 -
Acco02g2556 784 Gene3D Clc chloride channel 90 588 - -
Acco02g2556 784 MobiDBLite consensus disorder prediction 1 24 - -
Acco02g2556 784 Pfam Voltage gated chloride channel 155 569 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco02g2556 784 FunFam Chloride channel ClC3 90 432 - -
Acco02g2556 784 SUPERFAMILY Clc chloride channel 76 590 IPR014743 -
Acco02g2556 784 PRINTS Plant CLC chloride channel signature 439 455 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco02g2556 784 PRINTS Plant CLC chloride channel signature 283 291 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco02g2556 784 PRINTS Plant CLC chloride channel signature 72 80 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco02g2556 784 PRINTS Plant CLC chloride channel signature 297 307 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco02g2556 784 PRINTS Plant CLC chloride channel signature 315 322 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco02g2556 784 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 31 771 - -
Acco02g2556 784 Pfam CBS domain 718 767 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2556 Acco-ChrAcco02 23988111 23993874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2556 1 779 Ion Channels AT5G49890 70.038 0.0 1094