Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2554 ATGAACTATATGTATTCATTGTTAGGAATTAATTGTGAACCTTTTTTCATTCTCAAAGATTATAAATGTTTCGTTATATCATCGTTGTCAAAAATATTCAAATACCGGTTAGTGATTACCCTAGCCTCCTCCACCGCCCGCTCCTGTAACTCTTCTTCCCTTGCCCTGTTTCACAGCTCCGGTGATCTCTTCCTCGCCACCGCCAATTTCTGTTCTTTCTTGCTAACTCCTCGACGTTGCTCTCGAATTTCAGCTCACTTTCAAGTGTCTTACTTGGGTCATAAGGTTTCTATCCTCACAAACATGGCTACGAGACTTATGTTTGAGAACTCCTGTGAAGTTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTTTGGTTGCCATCGGAGGTTCTGAAAGCTTCTACAGTGTATTTGAGTCTGAATTAGCAGGTGTTATCCCTGTGGTGAAGACCTCCATTGGTGGGACTCGTATTATTGGCCGACTTTGTGCAGGAAACAGGAATGGGCTTCTCTTGCCACACACTACCACAGACCAAGAACTTCAACATTTGAGAAACGGTCTACCAGATCAAGTTGTTGTACAGCGGGTAGAAGAAAGGTTATCTGCTCTTGGAAATTGTATAGCGTGTAATGACCATGTGGCACTTGCGCACACTGATCTTGACAAGGAAACCGAAGAGTTGATTGCAGATGTGCTGGGAGTAGAAGTTTTCAGGCAGACCATTGCCGGAAATATTCTTGTCGGTAGTTACTGCGCCTTCTCCAACAGAGGTGGTTTGGTTCATCCTCACACTTCAATAGAAGACATGGATGAGCTCTCTACACTTCTTCAGGTTCCTCTGGTGGCTGGGACTGTGAACCGTGGCAGTGAGGTCATAGCTGCTGGCATGACTGTCAACGACTGGACTGCCTTTTGTGGATCAGACACAACAGCAACAGAACTCTCTGTGGTTGAGAGTGTTTTCAAGCTTAGGGAATCACAACCTAGTTCTATTGCGGACGAGAAGAGGAAATCGCTTATTGATGCTTACGTTTAA 1041 0.4448 MNYMYSLLGINCEPFFILKDYKCFVISSLSKIFKYRLVITLASSTARSCNSSSLALFHSSGDLFLATANFCSFLLTPRRCSRISAHFQVSYLGHKVSILTNMATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSVFESELAGVIPVVKTSIGGTRIIGRLCAGNRNGLLLPHTTTDQELQHLRNGLPDQVVVQRVEERLSALGNCIACNDHVALAHTDLDKETEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDMDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVVESVFKLRESQPSSIADEKRKSLIDAYV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2554 346 CDD IF6 103 324 IPR002769 GO:0042256|GO:0043022
Acco02g2554 346 SMART eIF6neu2 104 305 IPR002769 GO:0042256|GO:0043022
Acco02g2554 346 Pfam eIF-6 family 105 304 IPR002769 GO:0042256|GO:0043022
Acco02g2554 346 NCBIfam translation initiation factor IF-6 105 325 IPR002769 GO:0042256|GO:0043022
Acco02g2554 346 Hamap Translation initiation factor 6 [eif6]. 91 346 IPR002769 GO:0042256|GO:0043022
Acco02g2554 346 FunFam Eukaryotic translation initiation factor 6 102 326 - -
Acco02g2554 346 Gene3D - 102 326 - -
Acco02g2554 346 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 102 345 IPR002769 GO:0042256|GO:0043022
Acco02g2554 346 SUPERFAMILY Pentein 102 325 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2554 102 346 Eukaryotic Initiation Factors Gene Family AT3G55620 88.980 1.40e-167 465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g2554 02 23955284 23962306 Acco06g0881 06 5859251 5864962 CCT
Acco02g2554 02 23955284 23962306 Acco02g2554 02 23955284 23962306 ECH