Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2553 ATGGATCCCCCACTCTGCGCTAATGGTTGTGGTTTCTTTGGATCTCACGAGAATAACAACATGTGCTCCAAGTGTTATAAAGATCATGCTCTCAAGCTCAACGAACAGATCTATGAATCAATGGCAAATATCACTATGTCTTCATCGTTAATTTCTAAAGTTTCTGCTTCCGAATCTGATGAACCTAGAGAGAGAAAAAATAGATGTAAGAGTTGCAACAAAAAGGTAGGATTAACTGGATTCAAATGCCAATGCGGAGACTTATTTTGTGGAAAACACAGATATCCAGAAGAACATTCATGCACAGTAGACTATAAGCATATTGGTCGTGAACTCCTTCGTAAACAGAACCCTCTAATCCAAACGGATAAACTTTGA 378 0.3836 MDPPLCANGCGFFGSHENNNMCSKCYKDHALKLNEQIYESMANITMSSSLISKVSASESDEPRERKNRCKSCNKKVGLTGFKCQCGDLFCGKHRYPEEHSCTVDYKHIGRELLRKQNPLIQTDKL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2553 125 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 125 - -
Acco02g2553 125 Pfam AN1-like Zinc finger 69 106 IPR000058 GO:0008270
Acco02g2553 125 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 39 - -
Acco02g2553 125 ProSiteProfiles Zinc finger AN1-type profile. 63 109 IPR000058 GO:0008270
Acco02g2553 125 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Acco02g2553 125 SMART AN1_Zf_4 69 106 IPR000058 GO:0008270
Acco02g2553 125 SUPERFAMILY AN1-like Zinc finger 57 123 IPR035896 -
Acco02g2553 125 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Acco02g2553 125 FunFam Zinc finger AN1-type containing 6 43 124 - -
Acco02g2553 125 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Acco02g2553 125 Gene3D - 43 124 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2553 Acco-ChrAcco02 23948766 23949143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2553 5 125 C2H2 Transcription Factor Family AT3G52800 37.013 4.07e-28 99.8