Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2539 ATGATGAACTGTTTTCACCTTTTGGTTCTGTTTCTTCTGTCACTGAACATGAAGGTTATTTCACAGTTATTTCCAGGTGAAAGAGCTGCTCTTTTGCTTCTGAGGGATTCCTTAACTTCTCCTAATGATTTACATGGGAATTGGACGGGACCACCTTGTATAGACAACCTAAGTAGATGGAAAGGTATCACTTGTTTCAATTGGCATAAACAATTCCATTTCTGGGACTCTGCCAAATCCAACTTGGTGTTCTTGGAACATGTTTTACTTTCATATAATCGCTTCTACGGGTCAATTCCATTGGAGTATGTTGGATTGTCTGGTTTAAAAGAATTGGAGCTGCAAATGAACTACTTAGATGGTCAAATCCCAGCTTTTGATCAAGCTTCTTTGGATAGTTTCAATGTCTCTTATAATCATCTGGTTGGACCAATTCCTCAAACTTCTGTGCTGCAAAAATTTCGTAAGAGCTCTTTTGATAATAATTCAGACCTCTGTGGGAAGCCATTGGATATTTTGTGTCCTCCTCCTTCTCCAGCACCAGCTCCAAGCCCAGAAGCTCCCACAGAAAACAAGAGACTTGCAGTATGGATTATTGCTCTGCTTATTGCAGCACCTTCACTGGTTTTTTTACTGTTTACTATTGTCTTCTTGTTCTATAATAAAAAGGGTCAAGCAAAAGAAACAGCCAGAAATGAATATTCTGCAGGGTATGGTTTTGGAGCATGGGCAAAGAATATGATGTCCTATTCATTGAGCAATGAAGATTCTGGAAGGTCAGGCACATTGGAACTTTACAACAAGGAATACCCAATTTTTGACTTGGATGATTTATTAAGGGCATCAGCAGAAATGCTAGGCAAGGGAAGTTTAGGCACCACATATAAGACAACACTTGAAACTGGTGCTGTTGTTGCTGTGAAGAGACTTGATCACATGATCGGATTTGTAAAGAAGGAATTATTCGTCCAGCATATGCACTTGCTAGCAAGTTCGAAGCATGAAAATCTTGTTGAAATCATCTCTTTCTATTACTCAGGGGAGGAAAAACTGGTGGTTTATGAGTTTATCCCTACTTGCTCTTTGTTTGAGCTACTTCATGATAGCAGAGTTGGAAGAACTCCACTTAATTGGTCCACAAGGCTAGCTATAATCAAAGACATAGCAAGAGGTCTAGCTTTTCTACATCACTCTTTGCCTTCACATAAGGTCCCTCATGCCAATCTAAGAACAAGCAATGTCCTTATCCATCAAGATTCTCAAGGCTACCATTCCAAGCTCACAGACTTTGGCTTCTTACCCTTGATTTCTAATAAAAAATCTGCAGAAAAGCTGACAATAAGCAAGTCACCTGAATTTGTGCAAGGCAAGAAGCTGACACATAAAGCTGATGTATATTGCTTTGGAATCATCATCCTTGAGGTAATAACGGGGAAAGTTCCAGGTGAAAGCCTGGGTGAGATTGAAGAAACAACCGGTGATATTTCTGAATGGGTGAGAACAGTGGTGAACAATGATTGGTCCACGGACATTCTTGATGCAGAGATGTTAGCAACAAGAGAAGGGCATGGAGCTATGTTTGAGCTAACAGAGATAGCTCTACAGTGTACTGATATGATGCCTGAGAGACGGCCAAAAATGGATGAAGTTTTTGCAAGAATAGAAGAGATAGAGCAAAAGAAAGCAGAGAATGAGTGA 1698 0.3999 MMNCFHLLVLFLLSLNMKVISQLFPGERAALLLLRDSLTSPNDLHGNWTGPPCIDNLSRWKGITCFNWHKQFHFWDSAKSNLVFLEHVLLSYNRFYGSIPLEYVGLSGLKELELQMNYLDGQIPAFDQASLDSFNVSYNHLVGPIPQTSVLQKFRKSSFDNNSDLCGKPLDILCPPPSPAPAPSPEAPTENKRLAVWIIALLIAAPSLVFLLFTIVFLFYNKKGQAKETARNEYSAGYGFGAWAKNMMSYSLSNEDSGRSGTLELYNKEYPIFDLDDLLRASAEMLGKGSLGTTYKTTLETGAVVAVKRLDHMIGFVKKELFVQHMHLLASSKHENLVEIISFYYSGEEKLVVYEFIPTCSLFELLHDSRVGRTPLNWSTRLAIIKDIARGLAFLHHSLPSHKVPHANLRTSNVLIHQDSQGYHSKLTDFGFLPLISNKKSAEKLTISKSPEFVQGKKLTHKADVYCFGIIILEVITGKVPGESLGEIEETTGDISEWVRTVVNNDWSTDILDAEMLATREGHGAMFELTEIALQCTDMMPERRPKMDEVFARIEEIEQKKAENE 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2539 565 Gene3D Ribonuclease Inhibitor 74 178 IPR032675 -
Acco02g2539 565 SUPERFAMILY L domain-like 26 162 - -
Acco02g2539 565 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Acco02g2539 565 Gene3D Phosphorylase Kinase; domain 1 247 356 - -
Acco02g2539 565 Gene3D Transferase(Phosphotransferase) domain 1 358 565 - -
Acco02g2539 565 ProSiteProfiles Protein kinase domain profile. 280 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2539 565 SUPERFAMILY Protein kinase-like (PK-like) 284 554 IPR011009 -
Acco02g2539 565 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 80 561 IPR046959 -
Acco02g2539 565 Coils Coil 547 565 - -
Acco02g2539 565 Pfam Protein tyrosine and serine/threonine kinase 284 552 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2539 Acco-ChrAcco02 23590381 23592989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2539 45 563 Receptor kinase-like Gene Family AT1G68400 35.357 2.28e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco02g2539 PK_Tyr_Ser-Thr 1.2e-31 CL0016