Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2534 ATGGATCAGAAAACGCTGGAAGAAGGGGGACAAAACGCTTTGCATTTTAAATGTGCGAAGATTCTTCATGGAGCTGATAAATCTATCGCATGCCAGACTCCAGAGAAGACTATTGAGCCCTTACCTACCAAACCCAAGGAGGGATCCACCCAGCTTCCAGAAACATACAAGGCTTTAGCAGATTTATTTGATTATATGAGTTGTTCACTGAGGTTGCTTCGTCTGTGTAAAAATTCTACGACCTTTCAAAACATTTGTTCCCATGTTGAAGTTCTCGCTAAAAGAAAATTCTTGTTCACGGATCTTGCAAAGATAAAGTATATACTTCCTGAAGCCATACATATAGAGAAGATATTAGTACATGACAATAGAAACCTGTGTATGAAGCCTGATTTGAAGATCACCTTGGTATATGAGGTTGTGATAGGACACTCAAGTGAAAATAATCATATGGCACTCCGGAAACTGTTTGGTTCTAGGCTGCTTGAGTTCTTCAATAGGCATCCAGAGAATACTGATATTCCAGAAGCTACACTACCAGAACCTTTTCAACAAAGAGCTCATAGCTTGATTTGTGAGGACTTGCCTGTAGATCCTTCAAAAGTACTCTCACCTCCGACTTCGGATCAAAATCAACAGCTATCACAGGAATGTAAGCCATATCCTCTTAAAAGGCATTTCTCAAAGAAGAATGTTGTGGCAGAGACAGAAAATAATATTGTAGCAAGTCAAATCGCTCAGTCACATCATTCATATGACTGCTTAGATAATGAAGGAGGTGAAGGTGACAGTGAATGGCAGAAAAAATGTACTACTTCATATTTGAAATCTGATAAGGACATGGAAAAAGAACATCAGAATGAATCATGTTCTATGGGATTACAATGTAGTGTTGTCAATACACCAGCACACCTGATTTGCTCTCCACAGTCTGTTAGTTGTGGTAGTTCTGAAAGCTCTTATCTCAAGATTGCCTTGTCCACTGATGTGTTAATGGCAGAGACACCTGCTCAGTCAACACCTAGAAGATTGGCGCCCAATTCTGATGTTAAGCTTAATACTATGACCACTCGAAATTCAATTTCAAGCAATAAGCATGTAAAAAGAGTTCTTTTTTCACATCAAGGTGATTATGATGTTGACAAGTTACAATCAAGTAGAAATGCTTGTGATAACATCCCTGAAGCTAATGAAGCACACACTGAGGATTTTGATGTTTCTAATTCTGTGGTCCTTTCCCATAAGGTGGCTGAGTGCAATGATTGTTCTCCTGAAAATGCAAATCATACACAAGGTGGTTCAACAACCTGGCAGCAGACGCTGTCATCGTTGCTTGGCCTTGTTGATGTGATATATTCTATATTTTGTTCCATCAAATGCTCTCCAATCACAAAAGACGAGCTCCTGCACAAGATACTAATGAACAGTTTAGATTTTGTTGAGATGAGAGAAGCTGAAGAGCAGATTAATTTTCTTGAAAAGTTAGCGCCAGATTGGATCTACACGAAGTCGGGCCCTAGTGGAGATACTATGTACTGTATTAAGGAAGTGCCAGATCTGGAGTCTGTTCGATCAAGGCTATCTGGCAGTATTATTAACGCTTCGTGA 1608 0.3955 MDQKTLEEGGQNALHFKCAKILHGADKSIACQTPEKTIEPLPTKPKEGSTQLPETYKALADLFDYMSCSLRLLRLCKNSTTFQNICSHVEVLAKRKFLFTDLAKIKYILPEAIHIEKILVHDNRNLCMKPDLKITLVYEVVIGHSSENNHMALRKLFGSRLLEFFNRHPENTDIPEATLPEPFQQRAHSLICEDLPVDPSKVLSPPTSDQNQQLSQECKPYPLKRHFSKKNVVAETENNIVASQIAQSHHSYDCLDNEGGEGDSEWQKKCTTSYLKSDKDMEKEHQNESCSMGLQCSVVNTPAHLICSPQSVSCGSSESSYLKIALSTDVLMAETPAQSTPRRLAPNSDVKLNTMTTRNSISSNKHVKRVLFSHQGDYDVDKLQSSRNACDNIPEANEAHTEDFDVSNSVVLSHKVAECNDCSPENANHTQGGSTTWQQTLSSLLGLVDVIYSIFCSIKCSPITKDELLHKILMNSLDFVEMREAEEQINFLEKLAPDWIYTKSGPSGDTMYCIKEVPDLESVRSRLSGSIINAS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2534 535 Gene3D - 434 532 IPR038090 -
Acco02g2534 535 SUPERFAMILY "Winged helix" DNA-binding domain 49 183 IPR036390 -
Acco02g2534 535 SMART CDT1_2 52 181 IPR014939 -
Acco02g2534 535 Pfam DNA replication factor CDT1 like 52 117 IPR014939 -
Acco02g2534 535 CDD Cdt1_m 33 206 IPR014939 -
Acco02g2534 535 PANTHER DNA REPLICATION FACTOR CDT1 36 529 IPR045173 GO:0003677|GO:0030174|GO:0071163
Acco02g2534 535 Pfam DNA replication factor Cdt1 C-terminal domain 434 501 IPR032054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2534 Acco-ChrAcco02 23439982 23445361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2534 447 527 Core DNA Replication Machinery Family AT3G54710 40.741 1.83e-13 70.9