Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2533 ATGGACTTAAGCAGCAATATGTTAGATGGTGATGTATGTGTTATGCAGAATTGGGAAGCCACATTTGAGGTTCTTGATCTGAGTTCAAACAGGCTGTCTGAAAGCTTTGCCAATTTGACAAATCAGTTTGAGGGGTTAACCACATTTGCTCTCAGGAATAATTCCTTAGTTGGAACTTTGCCTTCTAATTTGAGGACCTATTCTAAATTGTCCATGGTTGATTTCAGTTTGAATGAACTTAATGGCCCTATTCCTCGCATAGACGACAACATCCATGGCAGTCAACGTTTTCCTCCTGGCATGCTCAGTATAGGTCACAACATCAAGGATAACATTATCAAGGAAAATCTTCAAACGAGGTTCCTCACGGCGACGACAGTGGCTTCTAACAATGGCAAAAGCATCGACTTCTCACGACGAGACGGAGCAGAAGCGGAAGGCTTAAGATGGGAAAAAGAGAAAGAGATGACAACAGAAAAAGAGAAAGAAGGATTTTGGCGAGGAAGAGATGACCAAGGACAACTTGTTGCAGAAGAGGAGGAGGAGGACAGAGAGAAGATTAGGAAGTTGGAGAAAGCCATGACTAACTTGAAAGGCTGTCATCTCAAATCCAAGATAGCAAAAGAACAAGAATGTATTGCAGAGATCATCAATGAAGTATCGGCTAGGATTATTCATACACATTTAGACGTTACTCAATATCCTGTTGGACTTGTGTCTCGGGGAACCAATAAAGTTGAAGTCATAGTTCTAGACCTACCTGGAGGTAGTGGAGCTCAAATCCAATGGAACAGAAAAGCATTCATGAAGATGAAGAATCTCAAAATGCTTGTGATACATAATGCAAGTTTTTCTGAATGTCCTGCACATCTCCCAAAGAGTTTACGTTGGTTGAAATGGAAGGGGTATCCTTTCAAGTTTTTGCCAGATATTAGCTCAACTGGACTCTTTTGTCTTGACTTGTCCTGCAGTTATTTTGATACCTTCCAACCATTTACAAAGACATTCCACACTTTAAGTCGCATGAATTTTAGAAATTGTAAATCTCTACAACAAATCCCAGATTTATTTGGAGTTTCTAATGTAAGAGAATTATGGCTTGATGACTGTATAAATTTAGTTGAAATCCATAATTCAATTGGACGTTTAAATAAATTGAAGGAATTGAGTGCCATGCGATGCAATAACTTGGAGATTTTGCCTACAGACCTTTGGTTGACATCTCTTGAACAACTCAACCTCTTTGGTTGTTCAAGTCTCAATAGTTTCCCCAATATATTAGTGGAGATGAAATATATTCAAACACTTGATATAGGGAGAACAGCCATTACTGCGTTGCCATCTTCAATTTGCAATCTTATTGGACTTGAAACCTTGAATGTGGAGGAATGTCCTTGTCTTGAGCAACTACCAACTACCATTTATCTGTTGCCAAACTTTTGGGCACTAAATGCAATTTTTTCTAAATTAATGACGCATTTTAAGGCACTCAACTTACAAACTGGGAAAACAAACTTTATTTTGCCTGGAGCAGAATTCCCAGAAAATCTGGACAATTATAGCAGGGGAAGCTGTGTGTCTTTTTGGGTTCGTGATGTGTTCCCAACAATCTTTCTATGGATTGTTGTTAAACAGGATCAGGATTTTCTCTCCAATTGTACATTCCTGGTTCACGTCAATGGCACCAAGCTGGATATTTCTTCTGAGTGGCATTTGTTGTCAACAATGAAGATGGGTCATTTATGTATATGTGATCTGCAAAGTATGATTCACAAGGCTGAACTCCGCCAAGGAAATAGATGGAATCATGTAAAGGTTTCCATCGAGAGCAATACACAAGAAACAAAAAGTGGAAGGGATCAATTTTATCTTGCCCTTCATGTCTGCAAGCAACAAAATAACTCGGATACTATCCGATTCAAGGACCCTAGAACAATATTCGCTGATAGCAACTCGGGACAAAGAGTACAACAACCTCAAGATTGGGAAGAACTTGAAGACGACGCGCCTTACCGAGCTATGGTCAGTCTCAAGGTGCAACGTTTTCCAAAAGAAGCTCTCAAGGTGAAGCAAGCAATACTCCCATGCAGATGGACTTATGATGTGTTTTTGAGTTACAGAGGTGATGATGAATGTTATAGTTTTGTTCGTTGTCTCTATAATTCCTTGTGCCAATGGGGAGTTCATGTCTTTGATAATGATGAATTAGGGAAGACTAGTCGAGAAAATTTGAAAGCATTACAAGAATCTCGAACAACTATCATAGTTATCTCCAAAAACTATGCATCCTTGCCTTCTTGTTTGAATAGTCTTGCAATCATTCATGAATGCTTTAGAACAGAATGTCGATTCATTTATCCAATATTTTATGATGTGGAGCCATTGGAGTTGCAACATCAAATGAGGAGTTATGGGGAAGTATTTGCTAGGCTTGAGAAGATATTCAAACAACATGTGCAAAAATGGAGGTTGGTTTTGTCTGAAGTAGCTGACTCAAGAGGCATGTGCCATCTCACTTCTGGGTTGACCACAAATGCAACAAAAGATGAGGATGCTATTCAATTGATCACGCATGATGTCTCTAGAAGGATTGAAGAATTTCCTTTCCACGTTGAGTACTTTTCTGTTAGACTTAAGTCTCGGGTACATAAAGTAATCTCACTTGTGGATATTGGGTCTAATGATGAAGTCAAAATCGTAGGAATTTGTGGCAGTAGAGTACGCAGATCAACAATGGCACGTGCTTTGTGTAATTCTATTGCTCGTCATTTTGATGATTTATGGTATTTTCATGGTGTTCATGAAATAGCCAGGGGCTATGCTTCCACATGGGATGATTTCCAGAATCGAATAACTCAACCATGGTTCCCACAGAGGAAGATTCTTGTAATTCTTGATGGTGTTGAAGTATCAGATCAGTTAGGAGCAATTGGAGAATGTGATCGATTTGCTAAAGGAAGCAGGATCATTGTGGCGACAATGGATAAACAATTGTTAGTAAGTCATGGTGTTGAAATAATTTATGATGATGAATGGAATTCTACATTGGATGAGAAGGGAAAAAACCCAAAGGAAAAAGAAGATCTCAAGGAAAAGTTAGCGGTATTTCCATCCGGATGGAGTTACGATGTGTTTTTGAGTTCTAGAGGTGATGATGAATGTTATAGTTTTGTTCGTCGTTTTTATAATTCCTTGTGCCAACGAGGAGTCCGTGTCTTTGATAATGATGAATTAGGGAAGACTAGTCGAGAAAATTTGAAAGCATTACAAGAATCCCGAACAGCTATCATAGTTATCTCCAAAAACTATGCATCCTCACCTTCTTGTTTGAATAGTCTTGCAACCATTTATGAGTGCTTTAAAAAGGAATGCCGATTCATTTATCCAATATTTTATGATGTGGAGCCATTTGAGTTGCAACATCAAACGGGGAGTTATGGGGAAGTATTTACTAGGCTTGGGAAGATGTTCAAACAATACGTGCAAAAATGGAGGTTGGCTTTGTTTGAAGTTGTTGACTCAAGAGACATGTGCCATCTCACTCCCGGATTGGTCTCGAATGCAACAGAAGATGAAGATATCGTTCAATTGATCACTCATGAAGTATCTGCGAGGATTGAAGAATTTCCTTTCCATGTTGAGTATTTTTCAATGAGACTTGAATCTCAGGTACAAAAAGTAATCTCACTTGTAGATATTTGGTCTAATGAGGAAGTCAAAATGGTAGGACTTTGTGGCGGCAGAATACATAGATCAACAATGGCACGCGCTGTGTGTAATTCTATTGCTTGTCATTTTGAAGATTTATGGGTCATTGTCGTGACAAGGGATAAACAATTGTTAGTAAGTCATGGTGTCGAAATAATTTATGATGATGAATGGGATTCTACATTGGATGAGAAGGGAAAAAACCCAAAGGAAAAAGAAGATCTTAAGGAAAAGCTAGCGGTATTTCCATCCGGATGGAGTTATGATGTGTTTTTGAGTTACAGAGGTGATGATGAATGTTATAGTTTTGTTCATCGTCTTTATAATTCCCTGTGCCAACGAGGAGTCCGTGTCTTTGATAAAGATGAATTAGGGAAGACTAGTCCAGAAAATTTGAAAGCATTACAAGAATCCCAAACAGCTATCATAGTTATCTCCAAAAACTATGCATCCTCACTTTCTTGTTTGAATAGTCTTGCAACCATTCATAACTGCTTTGGAATTGAATGTCGACTCATTTATCCAATATTTTATGATGTGGAGCCATTAGAGTTGCAACATCAAACGGGGAGTTATGGGGAAGTATTTTCTAGACTTGAGAAGATATTCAAACAACATGTGCAAAAATGGAGGTTAGCTTTGTCTGAAGTAGCTAGCTTAGGTGTCATTTGGCATCTCAGGCCAGCGACATTATTCCCATTTGTAATCTCAAGCAGAGGCCTTTCAACTGATAGGCCGGATATGGTTTCTGGTAAGGAACAAAATGGTGTACATTTTGATGGTTTTGACATTGGACTTGAATCTCATGTACAAAAAGTAGTCTCACTTGTGGATATTGGGTCTAATGAGGAAGTCAAGATGGTAGGAATTTGTGGAATACATAAATCAACAATAGCACGTGCTCTGTGTAATTCTATTGCTCGCCATTTTGAAGATTTACGGTATTTTCATGGTATTCATGAAATAGCCAGGGGCTATGTTTCCACATGGGATGATTTCCAGAATCGGATAACTCAACCCTGGTTCCCACAGAGGAAGATTCTTGTAATTCTTGATGGTGTTGAAGTATTGGATCGGTTAGGAGCAATTAGAGATTGTGATCGGTTTGGTGAAGGAAGCAGGATCATTGTGGTGATAAGGGATAGACAGTTGTTAGTAAGTCATGTTGTTGAAATAATTTATGATGATGAATGGAATTCTGCATTGGATGAGAAGGGAAAAAACCTAAAGGAAGAGGAAGATCTCAAGGCAAAGCGAGCAGTACTGCCATACAAATGGACTTACGATGTGTTTTTGAGTTATAGAGGCATACGCCATCATATCAATCCCAGGATTGCAACAAAAGATGATGAGAATGCTATTAAATGGATCACTGGGGAAGTCCATGCAAGGCTTGCTATGTTTCCTTTTCCAGTTCGGGATTTTTCAGTAAGACTTGAATCTCGTGTGCAAAAAGCAATCTCACTTGTGGATATTGGGTCTAATGAGGAAGTTAAAATGGTAGGAATTTGTGGAATACGTAAATCAGCAATAGCGCATGCTGTGTGTAATGTTATTGCTCGTTATTTTGAAGATTTATGGTATTTTCATGGTGTTAATGAAAACATCAGAGGCTATTATTCGGGATTCAAAAATTTCTCGTTAAGATTAGACTTGCTCCAACATAAGAAGAATCTTGTAATTCTAGAAATTCTTGATGGTGATGAAAAATGGGATCTTTTGTCAGAAACATGTGGAAATTTTCTTAAGCTTGGTGAAGGAAGCAGGATCATTGTGACGGCAAGTGATAAAGACTTGTTAGTAGCTAACGGAATCAAAATAATTATGGATGAGATAGAAGAAGACCCAAATGATCGATGA 5568 0.3847 MDLSSNMLDGDVCVMQNWEATFEVLDLSSNRLSESFANLTNQFEGLTTFALRNNSLVGTLPSNLRTYSKLSMVDFSLNELNGPIPRIDDNIHGSQRFPPGMLSIGHNIKDNIIKENLQTRFLTATTVASNNGKSIDFSRRDGAEAEGLRWEKEKEMTTEKEKEGFWRGRDDQGQLVAEEEEEDREKIRKLEKAMTNLKGCHLKSKIAKEQECIAEIINEVSARIIHTHLDVTQYPVGLVSRGTNKVEVIVLDLPGGSGAQIQWNRKAFMKMKNLKMLVIHNASFSECPAHLPKSLRWLKWKGYPFKFLPDISSTGLFCLDLSCSYFDTFQPFTKTFHTLSRMNFRNCKSLQQIPDLFGVSNVRELWLDDCINLVEIHNSIGRLNKLKELSAMRCNNLEILPTDLWLTSLEQLNLFGCSSLNSFPNILVEMKYIQTLDIGRTAITALPSSICNLIGLETLNVEECPCLEQLPTTIYLLPNFWALNAIFSKLMTHFKALNLQTGKTNFILPGAEFPENLDNYSRGSCVSFWVRDVFPTIFLWIVVKQDQDFLSNCTFLVHVNGTKLDISSEWHLLSTMKMGHLCICDLQSMIHKAELRQGNRWNHVKVSIESNTQETKSGRDQFYLALHVCKQQNNSDTIRFKDPRTIFADSNSGQRVQQPQDWEELEDDAPYRAMVSLKVQRFPKEALKVKQAILPCRWTYDVFLSYRGDDECYSFVRCLYNSLCQWGVHVFDNDELGKTSRENLKALQESRTTIIVISKNYASLPSCLNSLAIIHECFRTECRFIYPIFYDVEPLELQHQMRSYGEVFARLEKIFKQHVQKWRLVLSEVADSRGMCHLTSGLTTNATKDEDAIQLITHDVSRRIEEFPFHVEYFSVRLKSRVHKVISLVDIGSNDEVKIVGICGSRVRRSTMARALCNSIARHFDDLWYFHGVHEIARGYASTWDDFQNRITQPWFPQRKILVILDGVEVSDQLGAIGECDRFAKGSRIIVATMDKQLLVSHGVEIIYDDEWNSTLDEKGKNPKEKEDLKEKLAVFPSGWSYDVFLSSRGDDECYSFVRRFYNSLCQRGVRVFDNDELGKTSRENLKALQESRTAIIVISKNYASSPSCLNSLATIYECFKKECRFIYPIFYDVEPFELQHQTGSYGEVFTRLGKMFKQYVQKWRLALFEVVDSRDMCHLTPGLVSNATEDEDIVQLITHEVSARIEEFPFHVEYFSMRLESQVQKVISLVDIWSNEEVKMVGLCGGRIHRSTMARAVCNSIACHFEDLWVIVVTRDKQLLVSHGVEIIYDDEWDSTLDEKGKNPKEKEDLKEKLAVFPSGWSYDVFLSYRGDDECYSFVHRLYNSLCQRGVRVFDKDELGKTSPENLKALQESQTAIIVISKNYASSLSCLNSLATIHNCFGIECRLIYPIFYDVEPLELQHQTGSYGEVFSRLEKIFKQHVQKWRLALSEVASLGVIWHLRPATLFPFVISSRGLSTDRPDMVSGKEQNGVHFDGFDIGLESHVQKVVSLVDIGSNEEVKMVGICGIHKSTIARALCNSIARHFEDLRYFHGIHEIARGYVSTWDDFQNRITQPWFPQRKILVILDGVEVLDRLGAIRDCDRFGEGSRIIVVIRDRQLLVSHVVEIIYDDEWNSALDEKGKNLKEEEDLKAKRAVLPYKWTYDVFLSYRGIRHHINPRIATKDDENAIKWITGEVHARLAMFPFPVRDFSVRLESRVQKAISLVDIGSNEEVKMVGICGIRKSAIAHAVCNVIARYFEDLWYFHGVNENIRGYYSGFKNFSLRLDLLQHKKNLVILEILDGDEKWDLLSETCGNFLKLGEGSRIIVTASDKDLLVANGIKIIMDEIEEDPNDR 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2533 1855 Gene3D Ribonuclease Inhibitor 243 522 IPR032675 -
Acco02g2533 1855 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 246 483 IPR044974 GO:0006952
Acco02g2533 1855 Pfam TIR domain 700 834 IPR000157 GO:0007165
Acco02g2533 1855 Pfam TIR domain 1042 1176 IPR000157 GO:0007165
Acco02g2533 1855 Pfam TIR domain 1324 1452 IPR000157 GO:0007165
Acco02g2533 1855 SUPERFAMILY Toll/Interleukin receptor TIR domain 693 834 IPR035897 -
Acco02g2533 1855 Gene3D - 862 1007 IPR027417 -
Acco02g2533 1855 Gene3D - 1491 1629 IPR027417 -
Acco02g2533 1855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1699 1838 IPR027417 -
Acco02g2533 1855 ProSiteProfiles TIR domain profile. 1040 1206 IPR000157 GO:0007165
Acco02g2533 1855 SMART till_3 699 832 IPR000157 GO:0007165
Acco02g2533 1855 SMART till_3 1323 1456 IPR000157 GO:0007165
Acco02g2533 1855 SMART till_3 1041 1174 IPR000157 GO:0007165
Acco02g2533 1855 Gene3D - 1319 1466 IPR035897 -
Acco02g2533 1855 Gene3D - 1037 1211 IPR035897 -
Acco02g2533 1855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1500 1623 IPR027417 -
Acco02g2533 1855 ProSiteProfiles TIR domain profile. 698 864 IPR000157 GO:0007165
Acco02g2533 1855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 1006 IPR027417 -
Acco02g2533 1855 Gene3D - 696 861 IPR035897 -
Acco02g2533 1855 SUPERFAMILY Toll/Interleukin receptor TIR domain 1319 1455 IPR035897 -
Acco02g2533 1855 SUPERFAMILY RNI-like 21 487 - -
Acco02g2533 1855 Gene3D Ribonuclease Inhibitor 1 96 IPR032675 -
Acco02g2533 1855 SUPERFAMILY Toll/Interleukin receptor TIR domain 1037 1172 IPR035897 -
Acco02g2533 1855 ProSiteProfiles TIR domain profile. 1322 1467 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2533 Acco-ChrAcco02 23405256 23432559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2533 242 484 WRKY Transcription Factor Family AT4G12020 34.231 1.17e-23 107