Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2504 ATGTGCTCCAAGGGCTACGAGGATCATATTCTTAAGCTCAGTCTAGACATATGTGAATCAACCTCTGATGATCAAGAAATTCATACACCTGATGTGCACAAGAACGATGAGTCTTATCAGGATCATATTATTAAGCTTAGTCTACAAATCTGTGAATCGTCTTCTTCTTCATTTTACGATCAATATTTGCATACAGCTTATGAACACCCGGACGTGAATTTTTTGTTCTCTGCTTCTAAACTTGATGGATCTACAAAGAAAAAGAGGTGTAAGAGCTGCAACAAAAATGTCAGAGTAACAAGATTCAAGTGCCGATGTGGAAACTTGTTTTGTGGGAAACACAGATACCCAGAACAACATTCATGCACGGTAGATTATAAGCAGATTGGTCGTCACCTAAGTCAAAAACAGAACCCTCTTTGTAAAGCAGATAAACTGTTATTAAGAGTTTAG 453 0.3753 MCSKGYEDHILKLSLDICESTSDDQEIHTPDVHKNDESYQDHIIKLSLQICESSSSSFYDQYLHTAYEHPDVNFLFSASKLDGSTKKKRCKSCNKNVRVTRFKCRCGNLFCGKHRYPEQHSCTVDYKQIGRHLSQKQNPLCKADKLLLRV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2504 150 ProSiteProfiles Zinc finger AN1-type profile. 84 130 IPR000058 GO:0008270
Acco02g2504 150 Pfam AN1-like Zinc finger 90 127 IPR000058 GO:0008270
Acco02g2504 150 SMART AN1_Zf_4 90 127 IPR000058 GO:0008270
Acco02g2504 150 Gene3D - 75 145 IPR035896 -
Acco02g2504 150 SUPERFAMILY AN1-like Zinc finger 84 144 IPR035896 -
Acco02g2504 150 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2504 Acco-ChrAcco02 22959566 22960018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2504 86 146 C2H2 Transcription Factor Family AT3G52800 55.738 5.67e-19 77.0