Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2496 ATGAACCAAAAAGCCTCCGTCTCTAAGGAGCTCAATGACAAGTTATCCAAGATCTTAGAGGGTCTTCTTAAGCTGCCTGAAAACAAGGAATGTGCTGACTGCAGAAACAAGGCACCACGATGGGCAAGTGTGAATCTAGGAATTTTCATATGCATGCAATGTTCGGGAATCCACCGAAGTCTTGGAGTGCATATATCAAAGGTGCGGTCTACAACTTTGGATACATGGTTGCCAGAACAAGTCTCTTTCATGCAGTTCATGGGTAATGAGAAGTCAAATGAGTATTGGGAGGCAGAACTGCCACAGAATTTTGATAGAACTGGATTCGGACTCGAGAAGTTTATTCGTTCCAAGTATGTGGAGAAAGGGTGGGCTAAAATTGGAGGAGTAAATCCAGCTTCAAAAGCAGGTGAAATAATCTGTAATCTGAATCTGAATGTGCTACCACCTGGTCCCAAAGGTGGCTTTTCAAGGGCCAATAGGAGACATTCCCTTGAGGAAAGCATTCTTAGAAGCCACATGGAACAGATTGTGCCTCCAGTGACAAGACATCGTGGGGCTTCTCTTGACATTCCAAAAAGTACCACCATTACTCCGGGAAGGAGGCAGTCTCCATCAGTTGATTTTGATAAGTCCCCAATCAACAATATGAATGCCGACTTTTTCAGCATGTTTGGCGTCCATGGTGATAAGGACTCTGTAACTGTACCTCCTACTAGCTGGACAACTTTTGACTGTAAGACAATGATACTTACATCACACTTCATCTTCTATCGTCTCTCTTTTTTCTTTCTTCTTAGCCCATTTATAAGAGATTGTGTCAATATTGCAGATTTGCAGACTGTTCGGCTAGCCTTTGGTGTAGATGTCACAATATTATAG 882 0.4274 MNQKASVSKELNDKLSKILEGLLKLPENKECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVSFMQFMGNEKSNEYWEAELPQNFDRTGFGLEKFIRSKYVEKGWAKIGGVNPASKAGEIICNLNLNVLPPGPKGGFSRANRRHSLEESILRSHMEQIVPPVTRHRGASLDIPKSTTITPGRRQSPSVDFDKSPINNMNADFFSMFGVHGDKDSVTVPPTSWTTFDCKTMILTSHFIFYRLSFFFLLSPFIRDCVNIADLQTVRLAFGVDVTIL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2496 293 SUPERFAMILY ArfGap/RecO-like zinc finger 16 125 IPR037278 -
Acco02g2496 293 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 122 IPR001164 GO:0005096
Acco02g2496 293 Gene3D Arf GTPase activating protein 1 128 IPR038508 -
Acco02g2496 293 FunFam stromal membrane-associated protein 1 isoform X1 1 129 - -
Acco02g2496 293 CDD ArfGap 19 119 - -
Acco02g2496 293 Pfam Putative GTPase activating protein for Arf 17 126 IPR001164 GO:0005096
Acco02g2496 293 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Acco02g2496 293 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 198 IPR044520 GO:0005096
Acco02g2496 293 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Acco02g2496 293 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Acco02g2496 293 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2496 Acco-ChrAcco02 22750995 22754640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2496 19 119 C2H2 Transcription Factor Family AT4G05330 46.729 8.03e-27 105