Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2488 ATGGACACTTGGCCCATACGGAAAGCGATCTTCATCATGGTGAGGAAGAAGAGAACTGAAGCTCCTAGTGGAGGTGAAAGCTCTGAGACCCATGAAAGTGGGGGAAGCGGAAGAGGTTATCAACGCTCTCAAGAAAGAGGTGCTCAAGGCCCGCAACAATCAGCTGGAGGACCCCAAGGAGGTAGAGGCTGGTATCCTCAAGGAGGGCGTGGGGGTTATGGTGGAGGGCGTGGTCGTGGGTCAGGGTCACCCCAACAGCAATACAGTGGCCCCCCTGATTATCAAGGCAGGGGGAGGGGAGGATCATATCAACAGGGAGGTCGTGGTGGATACAGTGGTGGTCGAGGAGGTGCGGGCATAAGTGGACGTGGTGGAGGACCTTCATATGGTGTCCCATCCCAACCAGAAGTTCCCGAGCTGCACCAAGCAACCTCAGCTTCATATCAAGCTGGGGTGACTCCTCAGTCTGAGATACCTGAGGCCAGTTCTGTTTCACAACTTCCTGAGCCAACACAGTTGGAACAGCAAACTAAGCAGTTAACTATTCATCCAGAAGCTTCTTCTGCCCCGCCTGCCTCAAGTAAATCAGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTAGCTATGGCACAAAGTGTATTGTCAAAGCTAATCACTTCTTTGCTGAGTTACCTAACAAAGATCTTCACCAGTATGATGTAACCATAACTCCAGAAGTGCCATCAAGAGGTGTAAACCGTGCTGTCATGGAGCAGCTGGTTAGGCTGTACCGTGAGTCTCATCTAGGCATGAGACTACCTGCATATGATGGTCGCAAGAGCCTGTACACTGCTGGACCTCTTCCTTTTGTTTCAAATGAGTTCAGAATCACTCTCATTGATGAAGAGGAAGGAGGAGGAGCAGGAGTTCAAAGGAGAGTGAGGGATTTCAAAGTTGTGATAAAATTTGCTGCCCGAGCTGACCTTCACCACCTAGGAATGTTTTTGCAAGGAAGACAAACTGATGCACCTCAGGAAGCCCTTCAGGTTCTTGATATTGTTCTGCGTGAATTACCAACCTCTAGGTATTGTCCTGTCGGAAGATCTTTCTATTCACCTGACATAGGTAGGAGGCAACCGTTAGGAGAGGGTTTGGAGAGCTGGCGTGGGTTTTACCAGAGTATTCGTCCAACTCAGATGGGATTATCACTCAACATTGATATGTCATCAACGGCATTTATAGAACCACTGCCGGTAATTGATTTTGTGACTCAGCTACTGAACAGGGATGTCACCTCCCGTCCATTATCTGATGCTGATCGTGTAAAGATCAAAAAAGCACTCCGGGGTGTCAAAGTTGAAGTAACGCATCGAGGTAACATGAGAAGGAAATATCGCATCTCTGGCCTGACATCACAGGCAACTAGAGAGCTAACATTCCCTGTTGATGAGAGGGGGACTGTGAAATCTGTTGTGGAGTACTTTTATGAGACATACGGATTTGTTATTCAACATACTCAGTGGCCTTGCTTACAAGTAGGAAATACTAATAGACCGAACTATCTACCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCTAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTTAAAGTCACCTGTCAGCGACCTGTTGATAGGGAGCGGGATATCATGCAGACGGTTCATCATAATGCTTACCGTGAAGATCCTTATGCTAGAGAGTTTGGGATCAAAATCAGTGAGAAACTTGCTCAAGTTGAAGCACGCATTCTTCCTGCACCTCGGCTGAAGTATAATGATTCAGGAAGAGAAAAGGATTGCCTTCCTCAAGTTGGCCAATGGAATATGATGAACAAGAAAATGGTCAATGGGGGGACTGTTAACCACTGGATCTGCATAAATTTTTCAAGGAATGTTCAAGAGAGTGTAGCCAGTGGCTTTTGCTATGAACTTGCACAGATGTGTTATATATCTGGCATGGCATTTAATCCAGAGCCAGTACTTCCTGTGTTCACTGCCCGCCATGACCATGTTGATAAGGTTCTGAAATCACGCCATCATGATGCCAAGGCAAAACTTAAGGATAAGGAGCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAACGTATTTGTGAGACGGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACAAAACACGTTTTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCATTAAAAATCAACGTGAAGGTTGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGCATACCTTTAGTTAGTGACCGACCTACAATTATATTTGGAGCTGATGTTACTCATCCACACCCTGGGGAGGATTCTAGTCCATCTATAGCAGCTGTTGTGGCTTCTCAAGATTGGCCTGAAATTACCAAGTATTCTGGTTTGGTTTGTGCTCAAGCACACAGGCAGGAGCTTATCCAAGACCTTTTCAAACAGTGGCAAGATCCAGCGAGGGGGACAGTAACTGGTGGAATGATAAAGGAGCTTCTCATATCTTTTCGAAGAGCCACAGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAAGGACAATTTTATCAAGTTCTACTTTTTGAGCTTGATGCTATACGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCCCCTGTCACTTTTGTGGTGGTTCAAAAGCGTCATCACACGAGGCTGTTTGCTAACAATCATCATGATCGGAATTCGATTGACCGTAGTGGGAACATATTGCCTGGTACTGTTGTGGACTCCAAAATTTGTCATCCAACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGGATACAGGGTACGAGTCGACCTGCCCATTACCACGTGTTGTGGGATGAGAACAATTTTACTGCCGATGCACTTCAGACACTGACTAATAACCTCTGCTACACTTATGCAAGATGCACACGATCCGTTTCAATTGTGCCTCCTGCATACTATGCCCATTTGGCTGCTTTCCGAGCTCGATTTTATATGGAACCGGCCACATCGGATAGCGAGTCCATGAGTGCTGCTGCTGGACGTGGAGCGGGTGTTGGTGCAGGACGTAGCACTCGTGCACCAGGTGCAAGTGCTGCGGTCAGGCCTCTTCCTGCTCTTAAAGAGAATGTGAAGAGGGTCATGTTTTATTGTTAA 3210 0.4642 MDTWPIRKAIFIMVRKKRTEAPSGGESSETHESGGSGRGYQRSQERGAQGPQQSAGGPQGGRGWYPQGGRGGYGGGRGRGSGSPQQQYSGPPDYQGRGRGGSYQQGGRGGYSGGRGGAGISGRGGGPSYGVPSQPEVPELHQATSASYQAGVTPQSEIPEASSVSQLPEPTQLEQQTKQLTIHPEASSAPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVPSRGVNRAVMEQLVRLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEEGGGAGVQRRVRDFKVVIKFAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPTSRYCPVGRSFYSPDIGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVDRERDIMQTVHHNAYREDPYAREFGIKISEKLAQVEARILPAPRLKYNDSGREKDCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQESVASGFCYELAQMCYISGMAFNPEPVLPVFTARHDHVDKVLKSRHHDAKAKLKDKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQAHRQELIQDLFKQWQDPARGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAAGRGAGVGAGRSTRAPGASAAVRPLPALKENVKRVMFYC 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2488 1069 MobiDBLite consensus disorder prediction 14 201 - -
Acco02g2488 1069 FunFam Protein argonaute-2 402 528 - -
Acco02g2488 1069 Gene3D paz domain 402 527 - -
Acco02g2488 1069 SMART Piwi_a_2 697 1018 IPR003165 GO:0003676
Acco02g2488 1069 SMART PAZ_2_a_3 413 545 IPR003100 GO:0005515
Acco02g2488 1069 MobiDBLite consensus disorder prediction 138 194 - -
Acco02g2488 1069 Pfam N-terminal domain of argonaute 211 347 IPR032474 -
Acco02g2488 1069 Gene3D - 766 1069 IPR036397 GO:0003676
Acco02g2488 1069 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 187 1019 - -
Acco02g2488 1069 Pfam Argonaute linker 1 domain 357 407 IPR014811 -
Acco02g2488 1069 Pfam Mid domain of argonaute 606 680 IPR032473 -
Acco02g2488 1069 MobiDBLite consensus disorder prediction 26 56 - -
Acco02g2488 1069 SUPERFAMILY Ribonuclease H-like 686 1019 IPR012337 -
Acco02g2488 1069 ProSiteProfiles Piwi domain profile. 697 1018 IPR003165 GO:0003676
Acco02g2488 1069 ProSiteProfiles PAZ domain profile. 409 523 IPR003100 GO:0005515
Acco02g2488 1069 CDD Piwi_ago-like 567 1017 IPR045246 -
Acco02g2488 1069 SMART DUF1785_2 356 408 IPR014811 -
Acco02g2488 1069 Pfam Glycine-rich region of argonaut 90 189 IPR024357 -
Acco02g2488 1069 FunFam Argonaute 10 587 760 - -
Acco02g2488 1069 Gene3D - 587 760 - -
Acco02g2488 1069 Pfam Piwi domain 698 1017 IPR003165 GO:0003676
Acco02g2488 1069 Pfam Argonaute linker 2 domain 549 595 IPR032472 -
Acco02g2488 1069 CDD PAZ_argonaute_like 408 522 - -
Acco02g2488 1069 FunFam protein argonaute 10-like 766 1069 - -
Acco02g2488 1069 SUPERFAMILY PAZ domain 213 559 IPR036085 GO:0005515
Acco02g2488 1069 Pfam PAZ domain 413 538 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2488 Acco-ChrAcco02 22626786 22634184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2488 93 1069 Eukaryotic Initiation Factors Gene Family AT1G48410 81.117 0.0 1597