Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g2483 | ATGCTACTTACGGCGGTGGCAAAGCAGGCGGTGGAGATGGGTTACAAGAGAGTGGAGTGGACGTTGCTTGATTGGAACGTGAATGCGATCAATTTTTATGAGCATATGGGGGCCAAGACATTGTCTTTCTTTCTTCACATTTTCAAGGCACAAATCTCAGAAAAAAGAATACATGTTGGAGGGAAGCAGCCCTCTGCTTTGCGCCTTCCTACTATATCTCTTCTTCTAAGTGAACAAGCGCCCTTTTTAGTGAAGGATTTAACATTGGATATAAGTCACATGAGTGAGATAAGTGAAATCATTCTTACGAAAGTTCTTGAAGTTATCTGTTACGAAACAAAGGAAGAGGAAGAAGGAGAACATGATGATGCAATATATGAAACAAAGGAAGAGGAAGAAGGAGAACATGATGAACCAGCAGCTGGAAAAAAGAAAAACGTACTGGGGCTGGTGCACATGGGATTGTGGATTTTAGCAGCTGGAAAAAAGAAGAACGTATTGGGGCTGGTGCACATGGGATTGTTTATGTTGCCTGGCACAGCTAATAAGCCGGAAAGCGGAGCCTTATGTGCAGTAAAGGAACTCAACCTTCGCATGGCTGAAACTGATGAATCCATACGACATGAAATTAAAATTCTCAACCACCTGAAATATCATCCCAACATTGTAAAGTATTATGGCCAAGAAGAGGATGTAAGAGGCCACATTTGTCTATACATGGAACACATCCAACCTGGTTCATTGAAGAAATTAATCGGTAAATTACCTGAACCTTTAATTCAAAATTTCGCTGCACAAATTCTCTTTGGGCTGGTTCACCTGCATAGCAACAGACGAGTTCACAGGGACTTGAAGCCAGACAATATACTTGTTGATTCTAACAACATTATAAAGCTGGTTGACTTTGGTTTGGCTAAGTTGAATCTATAG | 930 | 0.4108 | MLLTAVAKQAVEMGYKRVEWTLLDWNVNAINFYEHMGAKTLSFFLHIFKAQISEKRIHVGGKQPSALRLPTISLLLSEQAPFLVKDLTLDISHMSEISEIILTKVLEVICYETKEEEEGEHDDAIYETKEEEEGEHDEPAAGKKKNVLGLVHMGLWILAAGKKKNVLGLVHMGLFMLPGTANKPESGALCAVKELNLRMAETDESIRHEIKILNHLKYHPNIVKYYGQEEDVRGHICLYMEHIQPGSLKKLIGKLPEPLIQNFAAQILFGLVHLHSNRRVHRDLKPDNILVDSNNIIKLVDFGLAKLNL | 309 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g2483 | 309 | SMART | serkin_6 | 161 | 309 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g2483 | 309 | Gene3D | Transferase(Phosphotransferase) domain 1 | 178 | 308 | - | - | |
| Acco02g2483 | 309 | MobiDBLite | consensus disorder prediction | 117 | 141 | - | - | |
| Acco02g2483 | 309 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 185 | 306 | - | - | |
| Acco02g2483 | 309 | MobiDBLite | consensus disorder prediction | 117 | 134 | - | - | |
| Acco02g2483 | 309 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1 | 58 | IPR000182 | GO:0016747 | |
| Acco02g2483 | 309 | ProSiteProfiles | Protein kinase domain profile. | 152 | 309 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g2483 | 309 | Pfam | Protein kinase domain | 184 | 306 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g2483 | 309 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 2 | 44 | IPR016181 | - | |
| Acco02g2483 | 309 | SUPERFAMILY | Protein kinase-like (PK-like) | 184 | 307 | IPR011009 | - | |
| Acco02g2483 | 309 | Gene3D | - | 1 | 54 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g2483 | Acco-ChrAcco02 | 22562587 | 22567861 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g2483 | 169 | 306 | MAP Kinase Kinase Kinase | AT5G66850 | 42.177 | 2.31e-28 | 113 |
Transcription factors information