Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2481 ATGTATAGAATAATATCCACGCCGGCCAGCAGATTCCGCCAATTCGGGCGACTCAAATCCAAGCACTTCTACGGCACCACCACCGACGAGGAACACGCCCATCTCATCCTATGGCGCCACCAGATCCTCGATCCGGACAGCGACATCGTCGCCCGTTGGAACAGGATCTTCCTCGTTACCAGTCTCATCGCGCTTTTCATCGACCCTCTTTACTTGTATCTCCCCAGCATCGGAGGCCCCGGCTGCTTGCAAGCCAATATAGAATTGAGCATCACCGTCACTCTTCTCCGCTCCTTCTCTGACCTCTTCTATGTCCTCCACATGATCATGAAATTTCGCACCGCCTTCGTTGCCCCAAATTCTAGGATTTTCGGCCGTGGTGAGCTCGTTACCGATGCCCGTGAAATTGCCAAACGCTACTTGAAGGCTGATTTTGCTATCGATCTCGCCGCAACCCTTCCACTGCCCCAGATTGTGATTTGGTTAGTGATTCCAACGTCCGCGGTTGACCATGCTCATATCACTCTGGCTCTTTTCGTGCTTATTCAGTATATTCCTAGACTGTTTCTTATCTTCCCGTTGAACAAGCGTATTGTTAAAACCTCTGGTGTTGTTGCCAAGACTCCTTGGACTGGAGCTGCCTATAATCTTCTTCTTTACATGCTAGCTAGTCATGTTATAGGAGCAACTTGGTATTTATCTGCAATAGCACGACAATTAAACTGTTGGACTGAAGAGTGCAGAGCTGAGAACGAGTTACAAATCCTGACTTGCCATATAAGTTATCTTGGTTGTAAGACTTTGAACGACCCTGATAGGCAATACTGGCTAAACGTCACCAATGTTGTTAAGAATTGCGATGTAAAGAGCCAAAATAACAAATATTCGTTTGGCATGTTTCAAGATGCTTTCAGGAAGGCAGTTGCTACTGGCAGTTTCAGTGAGAGGTTCTTCTATTGTCTTTGGTGGGGCATAAGAAATTTGAGCTCATATGGACAGACCTTGGACACCACTGTATTTGTTGGGGAAACACTTTTTTCCATCGTCCTATGCGTTGTTGGATTAGTTCTCTTTGCACTCTTGATTGGAAACATGCAGACATATTTAGAGTCAATGTCAGCAAGACTTGAAGAATGGAGGATTAGGAAGAGAGATACTGAGGAATGGATGAGGCATCGCCAGTTACCTCAAGAGTTGCAGGAACGTGTCCGTCGCTTTGTTCAATATCAGTGGCTTGCAACAAGAGGAGTTGATGAGAAATTCATACTTCGTTCATTACCTTTGGATCTTCGTCGTGAGATTCGACGCCACTTGTGTCTCTCCCTTGTTCGCCGTGTGCCCTTCTTTTCACAGATGGATAATCAACTTCTTGATGCCATTTGTGAACACCTTGTGTTGTCCCTGAGCACTGCTGGCACCTACATTTTTCGGGAGGGTGATCCGGTGAATGAAATGGTGTTCATCATAAGAGGGCAATTAGAGAGCTCGACGACGAATGGTGGAAGGTCTGGGTTCTTTAACTCCATTACCCTCAGACCCGGAGACTTTTGCGGTGAGGAACTATTGACATGGGCCTTAATGCCAAACTCAAGCTTGAACCTGCCTTCTTCAACTCGAACCGTTAGGGCTCTAACTGAAGTGGAAGCTTTTGCATTACTGGCAGATGATCTCAAAGCTGTGGCGGCTCAGTTCAAGCGGCTTCACAGTAAGAAACTTCAGCATGCTTTTAGGTATTATTCGCATCAATGGAGGGCATGGGCAGCTTGCATAATAGAGGCTGCTTGGAGAAAGCATAAGAAACGCAAGGCATCTAGAGAGTTGTCCCTAAGAGAGAGCCTCTACTATATTGCAAGACCAGAGGCAGAAGCTAGTTACAGTGATGACCTGCTTGATGATTATATGGAGGAGGAGGCCTCATCAAATGGCAATAATAATAATAATCAAGCTCTTGGTGCAACTGTTATGGCCTCCAAGTTTGCTGCTGCAAATGCAAGGAAAGGGACGACTAGTACTGTCCATAAGGCTCCACTGTTCAAGCCTGATGAACCTGATTTCTCTTTGCTATAG 2067 0.462 MYRIISTPASRFRQFGRLKSKHFYGTTTDEEHAHLILWRHQILDPDSDIVARWNRIFLVTSLIALFIDPLYLYLPSIGGPGCLQANIELSITVTLLRSFSDLFYVLHMIMKFRTAFVAPNSRIFGRGELVTDAREIAKRYLKADFAIDLAATLPLPQIVIWLVIPTSAVDHAHITLALFVLIQYIPRLFLIFPLNKRIVKTSGVVAKTPWTGAAYNLLLYMLASHVIGATWYLSAIARQLNCWTEECRAENELQILTCHISYLGCKTLNDPDRQYWLNVTNVVKNCDVKSQNNKYSFGMFQDAFRKAVATGSFSERFFYCLWWGIRNLSSYGQTLDTTVFVGETLFSIVLCVVGLVLFALLIGNMQTYLESMSARLEEWRIRKRDTEEWMRHRQLPQELQERVRRFVQYQWLATRGVDEKFILRSLPLDLRREIRRHLCLSLVRRVPFFSQMDNQLLDAICEHLVLSLSTAGTYIFREGDPVNEMVFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSSLNLPSSTRTVRALTEVEAFALLADDLKAVAAQFKRLHSKKLQHAFRYYSHQWRAWAACIIEAAWRKHKKRKASRELSLRESLYYIARPEAEASYSDDLLDDYMEEEASSNGNNNNNQALGATVMASKFAAANARKGTTSTVHKAPLFKPDEPDFSLL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2481 688 CDD CAP_ED 448 579 IPR000595 -
Acco02g2481 688 Gene3D Helix hairpin bin 372 439 - -
Acco02g2481 688 MobiDBLite consensus disorder prediction 669 688 - -
Acco02g2481 688 SMART cnmp_10 448 579 IPR000595 -
Acco02g2481 688 ProSiteProfiles cAMP/cGMP binding motif profile. 448 578 IPR000595 -
Acco02g2481 688 Pfam Ion transport protein 53 375 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco02g2481 688 Pfam Cyclic nucleotide-binding domain 471 563 IPR000595 -
Acco02g2481 688 FunFam Cyclic nucleotide-gated ion channel 1 446 564 - -
Acco02g2481 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 26 685 - -
Acco02g2481 688 FunFam Cyclic nucleotide-gated ion channel 1 375 439 - -
Acco02g2481 688 Gene3D - 57 371 - -
Acco02g2481 688 Gene3D Jelly Rolls 446 566 IPR014710 -
Acco02g2481 688 SUPERFAMILY Voltage-gated potassium channels 44 370 - -
Acco02g2481 688 SUPERFAMILY cAMP-binding domain-like 377 573 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2481 Acco-ChrAcco02 22535451 22538340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2481 36 687 Ion Channels AT5G14870 66.270 0.0 942