Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2479 ATGGCTTACAAGTTAAACACAGACCATCCTCGTAATCCGAACTTGGAAAGCTTCTTTCATTCGGTTCCTGAAGCTCAGCTCGCCGGAGAAGAAATGTCTACCACTCTTGCGGCTACCACTCCTGCAACTTCGTTATCTGTTTCTTTCCGCAACAATATTCTGAGAATTAGAATTAGTATGGCTAACATTCGAAGCAACCGAAATTTCCCTTCCTCATCGCTCAGAAATGGCTCCTCCTTCACGTTGGCGTCTTTACCTTCTCCTGCTTCTCAATCACCAACCCCTTCTTCCCATGCCAGACCCATTTCTTCTCCTTCAACTAAGCTCTATGTCAGCGGGCTATCTTTTCGTACCACTGAAGAGAGCTTGCGAAATGCCTTTAAGAAATTTGGTGAACTTGTGGAAGTCAGCCTGGTGATGGATAAAATAGCAAATAGACCAAGAGGATTTGCCTTTCTTCGTTATGCAACTGAAGAGGATTCTCAGAAGGCTATTGATGGAATGCACGGGAAGTTCTTGGATGGGAGGGTCATATTTGTGGAAGTTGCAAAACCAAGATCAGAGTTGCGCCAAAGGGTTAACCAAAACCCTAGATAG 597 0.4472 MAYKLNTDHPRNPNLESFFHSVPEAQLAGEEMSTTLAATTPATSLSVSFRNNILRIRISMANIRSNRNFPSSSLRNGSSFTLASLPSPASQSPTPSSHARPISSPSTKLYVSGLSFRTTEESLRNAFKKFGELVEVSLVMDKIANRPRGFAFLRYATEEDSQKAIDGMHGKFLDGRVIFVEVAKPRSELRQRVNQNPR 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2479 198 MobiDBLite consensus disorder prediction 80 104 - -
Acco02g2479 198 PANTHER NUCLEOLAR PROTEIN 8 87 191 - -
Acco02g2479 198 SUPERFAMILY RNA-binding domain, RBD 91 195 IPR035979 GO:0003676
Acco02g2479 198 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 109 178 IPR000504 GO:0003723
Acco02g2479 198 Gene3D - 88 198 IPR012677 -
Acco02g2479 198 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 107 185 IPR000504 GO:0003723
Acco02g2479 198 SMART rrm1_1 108 181 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2479 Acco-ChrAcco02 22511907 22514849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2479 107 196 Eukaryotic Initiation Factors Gene Family AT4G34110 30.851 1.74e-10 57.8