Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2478 ATGGAGATGCAGAATCAAAAAGAGAGCACAATGCCCAACAACTCTGGCATTGCTAGTAGCCGCTGTTCAGATGGCAGCACAAAATCTGAAAATGTTGTCTGCAGGAAGGATATAACTACTACAGGAGACAATTTTACTCCCAAGGCAAGGAAACCGTATACCATTACTAAGCAAAGGGAAAAGTGGACAGAGGAGGAGCATCTGAAGTTCCTTGAAGCCTTGAAATTGTATGGCCGTGGTTGGCATCAAATTGAAGAACATGTAGGTACCAAAACTGCAGTTCAGATTCGAAGCCATGCACAGAAGTTCTTCTCTAAGGTTGTGAGGGAGTCTGAGGGTAGCACTGAAAGTTCTATAAAGCCAATTGACATACCGCCTCCTCGGCCAAAAAGGAAACCGTTGCATCCATATCCTCGCAAATTGGCTGACTCATTCAAAGGACACTCAAATGAATCAGAAAGATCTCCATCTCCAAACCTGTCAGCTACGGCAAAAGACACCCAATCTCCAACTTCAGCGTTATCTGCATTTGGTTCAGAAGCATTTGGATCAGCATTTTCTGAGCAAACTAATAGATGTCCTTCCCCATATTCTTGCACTATTGACATCCACTCGGTCAGTTTATCACCAGTTGGAAAAGAAAATGATTGTAGTACATCCAATTCATCCCAGGAGGAAGACAAAGGATATTTAGCTTCAGGACGATCAATTTCTGATTTGAAGACAGAACTGTCCCTGAAGGTTGAGTTGACTACTGTGAAAAATGAGAATTCTACTGGAGATGCTGCCGACATGCCCCATGTGACAAGCATTAAGCTTTTTGGAAGGACTGTCTCCTTGACAAATAATCAGAAGTCAGTGAATATAGAAGAGAAAATTAAGTCAGTTTTATGTAAGGAGAACCCTAGCTCTGGTGAGTCAGGATTCAACGGTTCTTTACCATGCTGGAATTTATGCCCAGGTCTTCTAGATTTTGATCTTGTGCTAAGCAACGAAATTTTAAATTTTGCACCCCTCCATCCCTCCCTCACAGAGAGAACAATTGAGAAGGTAAGTCATTGTATTGATTCTAACGCTGAATCAGTTGATGAAATGGAAAATGGAGACAAGTTGAATGCTAGTGATTCTCAATTTCAATCATCCCATCATAAGGGAGGAATCTCCCCCAAATCTCCCCGAGGGTTTGTACCATATAAAAGGTGTTTAGCTGAGAGAGGTGGGAATGAATTTGTTGATGTATTGGAAGAGAGGAAAGGGCAACGAACTCGAGTGTGCTCGTAG 1281 0.4223 MEMQNQKESTMPNNSGIASSRCSDGSTKSENVVCRKDITTTGDNFTPKARKPYTITKQREKWTEEEHLKFLEALKLYGRGWHQIEEHVGTKTAVQIRSHAQKFFSKVVRESEGSTESSIKPIDIPPPRPKRKPLHPYPRKLADSFKGHSNESERSPSPNLSATAKDTQSPTSALSAFGSEAFGSAFSEQTNRCPSPYSCTIDIHSVSLSPVGKENDCSTSNSSQEEDKGYLASGRSISDLKTELSLKVELTTVKNENSTGDAADMPHVTSIKLFGRTVSLTNNQKSVNIEEKIKSVLCKENPSSGESGFNGSLPCWNLCPGLLDFDLVLSNEILNFAPLHPSLTERTIEKVSHCIDSNAESVDEMENGDKLNASDSQFQSSHHKGGISPKSPRGFVPYKRCLAERGGNEFVDVLEERKGQRTRVCS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2478 426 Gene3D - 61 108 - -
Acco02g2478 426 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Acco02g2478 426 CDD SANT 61 104 IPR001005 -
Acco02g2478 426 MobiDBLite consensus disorder prediction 210 229 - -
Acco02g2478 426 MobiDBLite consensus disorder prediction 108 172 - -
Acco02g2478 426 SMART sant 58 106 IPR001005 -
Acco02g2478 426 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Acco02g2478 426 MobiDBLite consensus disorder prediction 362 392 - -
Acco02g2478 426 MobiDBLite consensus disorder prediction 210 234 - -
Acco02g2478 426 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Acco02g2478 426 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Acco02g2478 426 MobiDBLite consensus disorder prediction 371 386 - -
Acco02g2478 426 MobiDBLite consensus disorder prediction 125 150 - -
Acco02g2478 426 MobiDBLite consensus disorder prediction 1 30 - -
Acco02g2478 426 SUPERFAMILY Homeodomain-like 53 107 IPR009057 -
Acco02g2478 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Acco02g2478 426 PANTHER SWI/SNF COMPLEX-RELATED 27 294 - -
Acco02g2478 426 MobiDBLite consensus disorder prediction 151 172 - -
Acco02g2478 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2478 Acco-ChrAcco02 22507267 22509915 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco02g2478 Myb_DNA-binding 2.2e-13 CL0123