Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2473 ATGGAGTACGGGACTGGAGGCGGTGGTGGGTCCCCTGGGGACCATCACCATCACCACCACCTTCACGACGGTTCTGATTCGCAGAGGGACAAGAAGCGATACCACCGTCACACTGCTAACCAGATTCAGAGACTTGAATCAATGTTCAAGGAGTGCCCCCACCCAGATGAAAAGCAGAGATTACAGTTAAGCAGGGAGTTAGGATTGGCCCCTAGGCAGATCAAGTTTTGGTTCCAGAACCGGAGGACTCAGATGAAGGCCCAGCACGAGAGATCAGACAACTGTGCTCTCAGATCAGAGAACGACAAGATTCGGTGCGAGAACATAGCTATCAGAGAGGCCCTAAAAAATGTCATTTGCCCTTCTTGTGGTGGCCCTCCTTGTCACGAAGATTCCTACTTCGACGAGCAAAAGCTTCGTTTAGAGAATGCTCAATTGAAAGAAGAGCTTGATAGAGTATCCAGCATTGCGGCTAAATACATAGGGAGGCCAATTTCTCAGCTCCCTCCGGTTCAGCCTATTCATATCTCATCTCTGGACTTGTCAATGTCGAGTTTTGGGGGCCAATCCATGCTGGTTGGTGGTCCTGGTCCTTCTCTTGATCTTGATCTTCTTCCTGGGAATACTCCGTCGTCGTCAGTTCCCAGTTTGTCTTACCAGGCGCAGGCAGTGGCGGCTTCTTTCTCCGACGTAGACAAGTCCCTCATGTCGGACATGGCCGGCAATGCCATGGATGAGCTGCTCAGGCTTTTGCAGACCAATGAACCCCTTTGGATAAAGTCAAACACAGATGGTAGAGAAGTTCTTAATCTTGACACTTATGGAAACACGTTTCCTAGATCAAATACTCACATCAAGAATCCCAATATTCATGCCGAAGCTTCTCGCGATTCTGGAGTTGTGATTATGAATAGCTTGGCCTTGGTCGACATGTTTATGGACCCTAACAAGTGGATGGAGCTATTTCCCACCATAGTTTCAATGGCAACTACAATTAAAGTGATATCTTCTGGAATGCTGGGTGGTCATAGTGGCGCTTTACAATTGATGTATGGAGAGCTTCAAGTGCTTACTCCACTGGTTCCAACTAGAGAATTCTACTTCCTGCGATACTGTCAGCAAATTGAGCAAGGTTCATGGGCAATTGTTGATGTTTCTTATGAAATCCCTCAAGATAACCAGTTTGCTCCTCAGTTTCGGTCTCATCGATTCCCATCTGGCGTCTTGATCCAGGACATGCCTAATGGCTATTCTAAGGTGACTTGGGTTGAACATGTAGAGATTGAAGATAAAACACCAACTCATCGTCTTTACAGAAACCTCATCTACAGTGGCTTGGCTTTTGGGGCAGAAAGATGGCTTGCAACACTTCAAAGAATGTGTGAAAGATTCGCTTGCTTAATGGTTACCAGCAATTCAACTCGTGATCTTGGAGGAGTGATTCCTTCCCCGGAAGGCAAGAGGAGCATGATGAAACTTTCACAAAGGATGGTGACCAATTTTTGCACATGCCTCAGTGCATCTAACGGCCAAAGATGGACCACACTTTCTGGGCTTAACGAGGTCGGCGTCAGAGTCACCGTCCACAAGAGCACAGAGCCCGGCCAACCAAATGGCGTCGTACTGAGCGCAGCTACCACCATCTGGCTCCCAATCCCTCCCCAGACCGTCTTCAATTTCTTCAAGGATGAAAGAAAAAGACCTCAGTGGGATGTTCTTTCAAACGGGAGTGCTGTGCAAGAGGTTGCTCATATAGCCAATGGGTCTCACCCTGGGAACTGCATATCTGTCCTTCGAGCCTTCAACACGACTCAGAACAACATGTTGATACTGCAAGAGAGCTGCGTGGACTCATCAGGATCCCTTGTGGTGTACTGCCCGGTTGATCTTCCGATGATCAATGTGGCGATGAGCGGGGAGGACCCATCAGGTATCCCGCTGCTTCCGTCCGGGTTCACGGTGGTGCCGGATGGGCAAGTGGAAGTAGGAGGTGTTGTTGGAGGAGATGGCGCGTCGAGCAGCTCGAGCACGGGGAGGAGACCAGGTGGGTCACTGATCACAGTGGCATTTCAGATTCTGGTGAGCAGCCTGCCATCTGCGAAGCTGAACTTGGAGTCAGTGACGACCGTTAATAACCTCATTGGCACCACTGTGCACCAAATTAAGGCAGCCTTGAATTGTCCTACTACTTCCTGA 2196 0.4913 MEYGTGGGGGSPGDHHHHHHLHDGSDSQRDKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERSDNCALRSENDKIRCENIAIREALKNVICPSCGGPPCHEDSYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMSSFGGQSMLVGGPGPSLDLDLLPGNTPSSSVPSLSYQAQAVAASFSDVDKSLMSDMAGNAMDELLRLLQTNEPLWIKSNTDGREVLNLDTYGNTFPRSNTHIKNPNIHAEASRDSGVVIMNSLALVDMFMDPNKWMELFPTIVSMATTIKVISSGMLGGHSGALQLMYGELQVLTPLVPTREFYFLRYCQQIEQGSWAIVDVSYEIPQDNQFAPQFRSHRFPSGVLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRNLIYSGLAFGAERWLATLQRMCERFACLMVTSNSTRDLGGVIPSPEGKRSMMKLSQRMVTNFCTCLSASNGQRWTTLSGLNEVGVRVTVHKSTEPGQPNGVVLSAATTIWLPIPPQTVFNFFKDERKRPQWDVLSNGSAVQEVAHIANGSHPGNCISVLRAFNTTQNNMLILQESCVDSSGSLVVYCPVDLPMINVAMSGEDPSGIPLLPSGFTVVPDGQVEVGGVVGGDGASSSSSTGRRPGGSLITVAFQILVSSLPSAKLNLESVTTVNNLIGTTVHQIKAALNCPTTS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2473 731 MobiDBLite consensus disorder prediction 1 37 - -
Acco02g2473 731 SMART HOX_1 29 92 IPR001356 GO:0003677
Acco02g2473 731 Gene3D - 15 102 - -
Acco02g2473 731 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Acco02g2473 731 Coils Coil 136 156 - -
Acco02g2473 731 FunFam Homeobox-leucine zipper protein HDG1 18 104 - -
Acco02g2473 731 CDD homeodomain 31 89 IPR001356 GO:0003677
Acco02g2473 731 Pfam Homeodomain 31 86 IPR001356 GO:0003677
Acco02g2473 731 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Acco02g2473 731 SMART START_1 238 463 IPR002913 GO:0008289
Acco02g2473 731 ProSiteProfiles START domain profile. 229 466 IPR002913 GO:0008289
Acco02g2473 731 Pfam START domain 240 463 IPR002913 GO:0008289
Acco02g2473 731 CDD START_ArGLABRA2_like 233 462 - -
Acco02g2473 731 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 726 IPR042160 -
Acco02g2473 731 SUPERFAMILY Bet v1-like 230 464 - -
Acco02g2473 731 FunFam Homeobox-leucine zipper protein GLABRA 2 238 462 - -
Acco02g2473 731 SUPERFAMILY Bet v1-like 484 722 - -
Acco02g2473 731 MobiDBLite consensus disorder prediction 12 33 - -
Acco02g2473 731 Gene3D - 239 462 IPR023393 -
Acco02g2473 731 SUPERFAMILY Homeodomain-like 11 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2473 Acco-ChrAcco02 22453714 22456976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2473 26 731 Homeobox Transcription Factor Family AT1G73360 67.232 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco02g2473 START 3e-50 CL0209