Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2471 ATGGCGGATTTGGAAAGAGATGAGGTGCCAATGCTGTTGGAGACAGAGCAACCATCAGTTGAATTGGCGGAGTCTAAATTACAGAGGCTTATATCCAGGACACGAAGTGCATCAATATCTATTCCTATGAGCTCCATGGAGTCATATGAGAGAGAAACTAGTCTTGTGGGACATACTGGTCCGCTAAGGAGTGAGAGGAAAACCCCCTTTTTGCAAATGAGTGGTCCACTACATGTCACCAACAGACATGGAAATCTATCCCGACAGAACGTCAATGCCACAGGGAACAAAGCAGTGGAGAGCATGACAGAGAAAATTGCTTTGCATGGAAGAGTTGGTAATGATTGGCAGAACAACTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCTACTTACTTCAAGACCTCTCAGCAAAGGAATCCTAAGGCTTCTGGTTTATTTGAGCACAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTATTTCTTTTCTGTCTTCATATGTCCCTGGAGTTATGAATCCTCATACTAAAGTTGTACAACATTGGAGCACATTTTTCGCCATTTCTTGCATAGAGGCCATTTTTGTGGATCCATTATTTTTCTTCTTGCTCGGTGTAAAACAGGACGAAAAATGTATTTTCATCAACTGGAAGTTGACATGGGCACTTGTTTGTGTTAGATCCATGAATGATTTTATATACTTCCTAAATATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGACTCCAGGGTGGTTGGTGCTGGCGATTTAGTTGACCATCCAAAAAAAATTGCTCTCCATTATTTGAAGGGTTATTTTTTTGTGGACTTATTTGTTGTGTTTCCACTTCCTCAGATAATGATATTGTTTGCCCTACCATATCACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCACTCCTTGTTCAGTATATTCCCAGATTGTGCAGATTTCTCCCTCTTCTAATTGGTCAGTCTTCAAGTGGATTGATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTGTGCTATCTGGCCATTTTGTTGGGTCTTGTTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGTCATAATGAGAAGTTTGATAACTGCATGGAATTGATTGATTGTGGGCATGGGAATAAAACTTGGTTCAGCAGTACTGGTGCAGCCAATTGTTTCAATACGTCAGACGGAGGTTTTGATTATGGGATCTATGGAAAAGCCGTTAACCTTGTTGCAGAACCAAATGTGATTACGAGATATGTGTATTCATTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAATCTAGTCCCAAGCTATTTTGTCTGGGAAGCCCTTTTTACAATGGGCATCATAGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAACTGTCACTTAGACGTCGTGATGTGGATCAATGGATGAGCCACCGGCGTTTGCCAGATGATTTAAGAAGGAGAGTAGTACTGGCTGAACGATATAATTGGGCTGCAACCAGAGGTGTAAATGAAGTAATGCTTCTGGAGAGTCTGCCAGAGGATCTTCAGAGAGACATTAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCCTGCTGGATGAACCTATCTTAGATGTCATATGTGAGAGACTACGACAAAAAACTTACATCAGAGGAAGCAATATTCTGTATCATGGTGGTCTGGTAGACAAAATGGTGTTTGTGGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGATTAGGGTTCCCTTGGTTGAAGGGGATGTCTTTGGTGAAGAACTCCTGACTTGGTGTCTCGAACATTCTTCTGTGAGCAGAGATGGTAAAAAAGTAAGGCTTCCTGGACAAAGATTGCTCAGCAACAGGACTGTATGCTGCTTAACAAATGTGGAGGCATTTGCACTAGGATATGGAGACCTCGAAGAAGTCACTAGCCTTTTTACAAGATTTCTAAGAAATGCGCGGGTTCAAGGAGCCATAAGGTATGAATCGCCATATTGGAGAAGCCTTGCTGCAACTCGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCAGTCGTGCGGATACCTCACAGTCAAATTATTAG 2280 0.4202 MADLERDEVPMLLETEQPSVELAESKLQRLISRTRSASISIPMSSMESYERETSLVGHTGPLRSERKTPFLQMSGPLHVTNRHGNLSRQNVNATGNKAVESMTEKIALHGRVGNDWQNNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRNPKASGLFEHKFHNALYGDAKGCARRFISFLSSYVPGVMNPHTKVVQHWSTFFAISCIEAIFVDPLFFFLLGVKQDEKCIFINWKLTWALVCVRSMNDFIYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPKKIALHYLKGYFFVDLFVVFPLPQIMILFALPYHLGSSGANYAKNLLRLALLVQYIPRLCRFLPLLIGQSSSGLIFESAWANFFINLLTFVLSGHFVGSCWYLFGLQRVNQCLRNACHNEKFDNCMELIDCGHGNKTWFSSTGAANCFNTSDGGFDYGIYGKAVNLVAEPNVITRYVYSLFWGFQQISTLAGNLVPSYFVWEALFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLELSLRRRDVDQWMSHRRLPDDLRRRVVLAERYNWAATRGVNEVMLLESLPEDLQRDIRRHLFKFVKKVRIFALLDEPILDVICERLRQKTYIRGSNILYHGGLVDKMVFVVRGRLESIGDDGIRVPLVEGDVFGEELLTWCLEHSSVSRDGKKVRLPGQRLLSNRTVCCLTNVEAFALGYGDLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSNY 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2471 759 SUPERFAMILY cAMP-binding domain-like 520 714 IPR018490 -
Acco02g2471 759 SUPERFAMILY Voltage-gated potassium channels 195 518 - -
Acco02g2471 759 Gene3D - 220 515 - -
Acco02g2471 759 SMART cnmp_10 590 725 IPR000595 -
Acco02g2471 759 CDD CAP_ED 590 706 IPR000595 -
Acco02g2471 759 ProSiteProfiles cAMP/cGMP binding motif profile. 590 658 IPR000595 -
Acco02g2471 759 Gene3D Jelly Rolls 588 712 IPR014710 -
Acco02g2471 759 Gene3D Helix hairpin bin 518 582 - -
Acco02g2471 759 Pfam Ion transport protein 203 518 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco02g2471 759 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 136 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2471 Acco-ChrAcco02 22392381 22408758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2471 5 668 Ion Channels AT3G17700 62.463 0.0 825